Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01468 ATGGAGTATCCCCCCCCAAAAGTTGATTATGAAGTTGAGGTCCTTCATGAAAAGGTCACCAAACAAATAATTAAGGAAGGCCATGGCCAGAAACCTTCCAAATATTCAACTTGCTTCTTCCATTACAGGGCATGGTCTGAGAGCACGCAACACAAGTTTGAAGACACATGGCAAGAGCAAAGACCAATTGGGATGGTATTAGGAAAAGAGAAGAAAGAAATGACTGGCTTGGGCATTGGTGTGGCAAGCATGAAAGCTGGGGAGCGGGCATTGCTGCGTATGGGCTGGGAATTAGGATATGGAAAGGAAGGAAGCTTTTCATTTCCAAATGTTCCACCCATGGCAGATTTAGTTTATGAAGTTGAGCTCATTGGCTTTGATGAAACAAAAGAAGGAAAAGCTCGTGATGATATGACTGTAGAAGAAAGGATTGGTACAACAGATCGGAGAAAGATGGATGGAAATGCTTTGTTTCAGGAAAATAAACTAGAGGAGGCTATGCAACAGTATCAAATGGCCATAGCCTATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAGTATAGGGATATGGCTCTGGCTGTAAAGAATCCATGCCATCTTAACATGGCAGCCTGTCTAATTAAGCTGAACCGCTATGAAGAAGCTATAGGACAATGCAACATTGTATTGGGTGAGGATGAGAACAATGTCAAGGCATTATTTAGACGAGGTAAGGCTAGAGCAGCACTTAGGCAAACAGGTGCTGCCAGGGAGGATTTTCTAAAAGCACGAAAATATGCCCCTGAAGATAAAGCAATTGCAAAAGAATTGAGGTTGCTTGCTGAACATGACAAGGCTACTTACCAAAAGCAGAAAGAGATTTATAAAGGAATATTTGGAGCAGGCCGAAAAGATCAACCCCTGTAA 912 0.4243 MEYPPPKVDYEVEVLHEKVTKQIIKEGHGQKPSKYSTCFFHYRAWSESTQHKFEDTWQEQRPIGMVLGKEKKEMTGLGIGVASMKAGERALLRMGWELGYGKEGSFSFPNVPPMADLVYEVELIGFDETKEGKARDDMTVEERIGTTDRRKMDGNALFQENKLEEAMQQYQMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNMAACLIKLNRYEEAIGQCNIVLGEDENNVKALFRRGKARAALRQTGAAREDFLKARKYAPEDKAIAKELRLLAEHDKATYQKQKEIYKGIFGAGRKDQPL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01468 303 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 35 127 IPR001179 GO:0003755
Rops4g01468 303 Gene3D Tetratricopeptide repeat domain 129 260 IPR011990 GO:0005515
Rops4g01468 303 SMART tpr_5 147 180 IPR019734 GO:0005515
Rops4g01468 303 SMART tpr_5 198 231 IPR019734 GO:0005515
Rops4g01468 303 SMART tpr_5 232 265 IPR019734 GO:0005515
Rops4g01468 303 PANTHER ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED 64 299 IPR039663 -
Rops4g01468 303 Gene3D - 4 128 IPR046357 GO:0003755
Rops4g01468 303 FunFam Peptidylprolyl isomerase 132 260 - -
Rops4g01468 303 SUPERFAMILY TPR-like 147 288 IPR011990 GO:0005515
Rops4g01468 303 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 31 124 IPR001179 GO:0003755
Rops4g01468 303 SUPERFAMILY FKBP-like 8 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01468 Rops-Chr4 37245485 37246396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01468 70 298 Calmodulin-binding Proteins AT3G25230 33.043 5.70e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01468 - - gmx:100790587 549.28