Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01383 ATGGATCCTCTTACTTGGTTTAGTCAAATCCTGACGTCACCTCATGTAAGGGAGTGGCTGAGGCAACAACTGATTCATTTGAAGTCATACGAGGCAAGACTTGGGGAACTAAAAGGTGTTGTTGAGAAGCTCCGGGAAGAGAAGGATAGAGTTCAAAATAAAGTTAAGGAGGAGGAAGAAACCCGTAATTGGAGAGGAATTGCCCCTAAAGTTGAAAAATGGATAAATGACGTGAATGCAATAATTTCTGAATATGAAAAGTTTGATGAGGACAGAGGCCCTCATGCACTTGCCGTGTTTGACTTGTTTACAAGTGGTTACCTTCCTAAGCCGGGAATAAGGGGTCGTCTAAGCAGAGAAGCATACGCTATTATAAGGAAGGTTAATGGACATCTACAAACGGAAAAGTTTGATGATTATACTGTTTGGCTTGGCCTACCCTCCACTGCTTCCTTGTTTTGTAATGATTTTTATGAAAAGTTTCCATCGAGAGATGGAACTACGAAAAATATTAAGGATGCATTGGGAAACCCGAGTATTAGAATGATTGGACTGCACGGGTTGAAAGGTGTGGGCAAGACTACCTTAGTAAAGGAAGTTGCTAAGGAAGTTTTAGATGCTAATGTGTTCAAAGTGATCATGGCAGACGTGAAAGGCAATCCTGGCATAAAACAAATTCAAGAACAAATTGCTGACATGTTGGGGATAGCATTGGGCGAGGGAGGTGACTTTGCAAGAGCTGCTCTAATAAAAGGCCAATTAATGAAGCAGAGCACGCTTGTAATCCTCGACGATCTTTCCACGGAATTGGATTTCAAGAAGCTGGGGATTCCGTCTGAGAATGATAATAATCCTGGGCAGCACGAAGGGTGCAAAGTTTTGCTGATTTCTGAAAGCAAACAACTATTATTAAGTTATATGGAAGAAGATTATACTTTCTATATGGAAGTCTTAAACGAAAATGAAGCAGAGAGACTCTTCAAGAAAGTGGTTGGATTAGGTGATGGAAATTCTGAATTTCACGAATTAGCTGCTCAAATTGCCAACAAATGTAACAGGTTGCCAATGACTATAGTTACAACTGCAAGGGACTTAAAAAACTTTAAAAAAGAGAAAGATCTATCGATATGGGAGGATACCCTCCAAAACCCTGAACTTCAAAAGTTGACAGGGGCACCCGAGTCTTCTACAAAGCTGTGTTATCGTCTTTTACCAGAAGAGGAGCTCAAGAAAACTTTCTTACTTTGTGCTCGCATGGGTCATGATGCACTAATTATGGACTTGGTGAAAAACTGCATTGGTCTGGGTTTTCTTAAAGGAATTTACACAGTAAGGGATGCTAGACGCAGAGTACATAATTTGCTTAGAAAGCTAAAATGGTTTGGTTTGTTGTCTGAAAGTAATTCAAGTGATCGTTTCAACATGCAAGATATTGTTCGTAATGATGCTTTGTCAATAGCATCCGAGGAGAAGAAGCCTGTATTTACAATGACAAGGGGAAAAGTAGATGAATGGCCCGATAATCTTGAAAGGTACGCTACTATTTCCTTGCGTCATTGTGATATTGTTGGGTGGTTTCCTACAAGAATAAATTGCCAAAGACTTGAAGTCTTTCATTTTAATAATAATGATCCGTGTCTAGAAATACCAAAAAACTTTTTTGAAGGAATGAAAGAACTCAAAGTGTTGATATTGACTGGCATTCATCTATCACCCTCAGAGTCGTCGATTGCATCTCTAGAAGAACTCAGAATGCTTTGTTTGGAGCAATGCTTCCTAGATAAGGAATTATCCATCATAGGCAAGTTGATAGAATTAAGAATTCTTAGTTTATCAGGATCTGATATTGAAAATTTGCCTGTTGAATTGGAACAATTGAAAAAGCTACGAATTTTTGATATAAGTCATTGCTCAAAACTTGGAGAAATTCCTTCCAATGTAATATCAAGTTTGAGTAGTTTGGAAGAGTTGTATATGAGAAACACTTGGATTCAATGGAAGGATGAAGAACAAACATATCCTAATGAAATTGCTAGTCTTTCTGAGTTGAGGCATTTGACTCTGTTGACAACTCTAGACATACAAATCCCAGATGTTGCCCATTTGCCGAAGGACTTGAAATTTGATCATTTGGATAGATATAAGATTGTTGTTGGTGATGTGAATGCATATTTAGAGGCGGATTTCAAGATGCCTGAAAAGTATGTAGCATCAAGATTATTGGCAGTCCTGTTAAAAGATGGTTCTGACATTCATTCTCAACAGGGTATCAAAATATTGTTTGAAGGAGTGGAAAATTTGTTGTTGGGAGATCTTCATGGTGTCCATGATATTTTCTATGGATTGAATTTGAAAGGATTTCCATGTCTAAAACACTTGTCGATTGTTAATAATTCTGAAATCCAATCTCTCATTAAGCCAGAAGATAGACATGATCCTTGGGAGGCATTTCCTAAATTGGAGTCACTGTATCTTTATAATCTCAAGAACATGGAAGAAATATGCTCCTGTGAACTTTCAGCACCCTCCTTTGCTAAATTGAAAGTCATCAAGGTCAATCTCTGTGGTCAATTGAAGAATGTCTTCTCAATTTCTATAATTGAACTTCTAAAGGTTCTTGAAACATTTGAAGTTTCTGAATGTAACTCCTTGGAGAAGATTGTCCCTGTGGAAACGCAAAGCAATACTAATGAAATTGAGCTTCTTACGTTTCCTGAATTACGTTCTTTGACGCTACAGTCTTTATCTGAATTCATTGGATTTTATTCCAGGTCAACAATAGGAGAGACCAGAAAACTCTTCCACGAAAAGGTTGAAGTTTCCAAATTAGAAAGAATGAAATTGTGCTCTATCAAGATTGACTTAATATGGAGTGAAGAAACTTCACTAAGTTCCTATTTTACAAATTTGACACACTTGGATGTGAATGATTGTTGGAATTTAACATATTTATTGACATTTTCAATGGCCAAAAGTCTGGTGAATCTTCAAAGCCTTTTCGTAAGTGAATGTGGGAAGATGAGACACATATTTAACCAAGGGCAAGAAGGTCATGCTGTAATAGAGGGTATCTTTCCAAATTTAAAGAATCTCAATCTGAGTAGCATGAAGAATCTGTGTGAGATATGGAATTGTGAACTCCCTCCAGATTCCTTTGGCAAACTGGATACTCTGATCGTTGAGGAGTGTGATAAATTTGTCAACGTTTTTCCGTGTTACATGGAGGGAATTTGTCAGAGTCTATGCAACTTGAGGGTTACTAATTGCAGGTCAATGAAAGCGATATTTGACCTAGATGATAAAAAACGAAAAACCGGAGTTGTAACCAACTTGCAAGATGTTCATTTAGAAGTACTCCCAAAATTGAAGCATGTATGGAAATGGAACAGAGACCGGAAAGGAATTCTGGACTTGAACAAGCTGCAAAAGATATGGATTCATGATTGTGATAGCTTAGAGAATATATTTCCATTTTCTGAAGCCCAGTATCTTGTCAATCTTCAATACCTTGTGGTAGGGGATTGCTCTACATTGAGAGAAATTGTTGCCAAAGTAGAAGGTGCCAACACCAACACAAGCAGTCCTATGGTATTCAAGTTTCCTAAACTAACCACCATCAAATTTTCGAAACTACCGAAACTTAAGAGCTTTTATCCAGGAGCTTATGAATTAGGTTGTCCAACATTGAACGACCTGTCTGTTAAGCTTTGTGACAAGCTGGAACCATTCACAAAGGGAACCACATATGAACATAGAAAACCAGCCCTATTTCCTGAAGAGGTAATCATTAAGTTGAAGTCCATGCAAATTGAGTCGTGGCGTGCAAAGTCATCTAGTAGCTTCATGGGGAAGAGGAACTACCGAAGGAAGAACTTAGAAGAGCTTCACTTATACAAATTAAAGAATACTGACATAATATATTTTTTCCTTTATAGCAATACTAATCTGAAAAGCTTATCTTTGATCGATTGCTTCTTGGAAGAGATAGTGCCTCTCAGAAGGCCTACTGAAGTTCAAAAGGTGGGGCTTGTTCCAATACTGAAAAGCTTGAAGTTAATAGACTTGCCTAATCTTAAGAAGATAGGCTTTGAACGAGACATAGTTATTCAAAGGATAGAGCTCTTGATTTTAAACAATTGTCCTTCTTTAGTCAATATAATGCCTTCCTCGGTATCTCTTACTCACTTGACATATTTGGAAGTGGTTAATTGTGATGGGTTAGAAACATTAATGCCACCATCGATTGCAAAAAACATGGGTCAACTCAACACCATGAAGATAATCAAATGTGACTCTCTGAAGAAAATTGTAGAAAATAAAAAGGAATATGCTGACATTGTTTTCAGACAATTGAAAGCTCTAGAACTCGTGTCACTGAAGAGCCTCAACAGTTTCTGCAGATCTAGGAGTCTTGTCTTCGTGTTCCCATCATTGGAGAAATTGGTAGTGAGTGCATGCCCCAAGATGAAAAGTTTCTCTTCAAAAGTCAAGAGCACGCCACTTTTACAGAAAATATATGTCGTACCTGAAAATGAGCAGAGATGGTGCTGGAAAGATAATTTAAATGCTACCATACGATATATATACAAGGAAAAGAAGTTTTATGAAGGCATGGAAGATATCAATGTTTCCGAACATCCTGAGCTACAACAAACCTGGTATGGTAAACCATTTCTGCAAAAGAATTGGTTTTACAGTTTGAAAACTTTGAAGCTGGAAGACTGTAACTATCAATTATGTGCAATTCCATCTAATATTCTCCCTTGCTTAAAGAGCTTAAAAGAATTGGAAGTACGGGGTTGCGAGAGGATAGAGGTAATCTTTGATATGAATGACACAGAGATTATGGGAACAGCATCGCAATTGAAGAAACTGACTTTAGAAAGGCTACCGAAGCTGACACGTGTGTGGGAAAAGAGTAGTCAAGTGAGTGTCAGCTTTCAAAATCTGCAACAAGTCATAGTTCGTGATTGTGAAAATCTGGAAACTCTGTTTCCTGCGGCCCTGGCCAAAAATCTTATGAAGCTCGAGAATCTTGAAATAGAATCCGGAGGGTTGCGAGAAATTGTTGAAAATGAAACTGTCAGTGAGGAAGTGACAAAAAAGCTTGCTTTCCCTTGTTTAATGGAACTGCGTCTTCTTGATTTGGCAAGCCTTTACCCTAGAACATTCACTCTAGAATGCCCTGCGTTAAATTCTTTATTAGTGTGCTCTTGTCGTAATTTGGAGCTATTTCAAAGTGCACATTTGGAGAGTGAGAGTGAAGGTATTAGTACTCACAAAGAACCCCTTTTCTCGGATCTAAAGCCCTTTCTTTCCCTTTATCAAGCCATTTCCAACCTGGAGGTATTGTCACTCGATTGGGACGAGACTTTAAGGTCAAGGTTCGGACAATCTACGGAAAACCTCATATATTTAAATGAACTTGCCCTGAATTTATATTATTTTTTTGAGGAAGAGAAGCTAAGGTTTCCCTTTGAAATACTTGAGAAGGCACCAAATGTAAAAGTTTTGCGTATGTGCTGTTGCGATAATCCCAAGATACTCCTCACTCAAAACCCCAAAATTGGTGAAGACAGGATGCTTGGACACTTGGAAATATTGTCACTGAACCATATAACTCAGCTCCAGTCCATCGTGTCAGAGAGCTCATCATGTTTAAACACAATTTGTGAGAGGCTGCGCGGACTAATTGTTTCCAATTGTCCTGATTTGACAACAATAGTACATCCTACTTCTGCAGTATCTTTCTCCCATCTAAGAGAGTTGGAGATTACCGAATGTCATGGATTGAATTATTTATTCACATCCTCAGCAACAAAGCAGTTAATACACCTTGAGGAGATAACAGTCGAGGATTGTCAAACAATGAAAAAAATAGTGGAAACAGATGACATTTCGGGAGGGGTCAAATTTGAGCAGCTAGACTGGATAGTTATAAATTCTTTACCAAGCCTGGAATGTTTTTATTCAGGCAATGACACTTTGCAGTTACCATCTCTGATACAAGTGGACATATTGAAGTGCCCCAAGATGGAAACTTTCTCTCGAGGATCGATAGATGCAGAATCTCTTCGAGGAATTCGAGTTGACGATGATTTGGTCTTTTACGATGATCTTGACCTGTTTGGAGGAATAAAGTTTCAACAATAG 6153 0.3814 MDPLTWFSQILTSPHVREWLRQQLIHLKSYEARLGELKGVVEKLREEKDRVQNKVKEEEETRNWRGIAPKVEKWINDVNAIISEYEKFDEDRGPHALAVFDLFTSGYLPKPGIRGRLSREAYAIIRKVNGHLQTEKFDDYTVWLGLPSTASLFCNDFYEKFPSRDGTTKNIKDALGNPSIRMIGLHGLKGVGKTTLVKEVAKEVLDANVFKVIMADVKGNPGIKQIQEQIADMLGIALGEGGDFARAALIKGQLMKQSTLVILDDLSTELDFKKLGIPSENDNNPGQHEGCKVLLISESKQLLLSYMEEDYTFYMEVLNENEAERLFKKVVGLGDGNSEFHELAAQIANKCNRLPMTIVTTARDLKNFKKEKDLSIWEDTLQNPELQKLTGAPESSTKLCYRLLPEEELKKTFLLCARMGHDALIMDLVKNCIGLGFLKGIYTVRDARRRVHNLLRKLKWFGLLSESNSSDRFNMQDIVRNDALSIASEEKKPVFTMTRGKVDEWPDNLERYATISLRHCDIVGWFPTRINCQRLEVFHFNNNDPCLEIPKNFFEGMKELKVLILTGIHLSPSESSIASLEELRMLCLEQCFLDKELSIIGKLIELRILSLSGSDIENLPVELEQLKKLRIFDISHCSKLGEIPSNVISSLSSLEELYMRNTWIQWKDEEQTYPNEIASLSELRHLTLLTTLDIQIPDVAHLPKDLKFDHLDRYKIVVGDVNAYLEADFKMPEKYVASRLLAVLLKDGSDIHSQQGIKILFEGVENLLLGDLHGVHDIFYGLNLKGFPCLKHLSIVNNSEIQSLIKPEDRHDPWEAFPKLESLYLYNLKNMEEICSCELSAPSFAKLKVIKVNLCGQLKNVFSISIIELLKVLETFEVSECNSLEKIVPVETQSNTNEIELLTFPELRSLTLQSLSEFIGFYSRSTIGETRKLFHEKVEVSKLERMKLCSIKIDLIWSEETSLSSYFTNLTHLDVNDCWNLTYLLTFSMAKSLVNLQSLFVSECGKMRHIFNQGQEGHAVIEGIFPNLKNLNLSSMKNLCEIWNCELPPDSFGKLDTLIVEECDKFVNVFPCYMEGICQSLCNLRVTNCRSMKAIFDLDDKKRKTGVVTNLQDVHLEVLPKLKHVWKWNRDRKGILDLNKLQKIWIHDCDSLENIFPFSEAQYLVNLQYLVVGDCSTLREIVAKVEGANTNTSSPMVFKFPKLTTIKFSKLPKLKSFYPGAYELGCPTLNDLSVKLCDKLEPFTKGTTYEHRKPALFPEEVIIKLKSMQIESWRAKSSSSFMGKRNYRRKNLEELHLYKLKNTDIIYFFLYSNTNLKSLSLIDCFLEEIVPLRRPTEVQKVGLVPILKSLKLIDLPNLKKIGFERDIVIQRIELLILNNCPSLVNIMPSSVSLTHLTYLEVVNCDGLETLMPPSIAKNMGQLNTMKIIKCDSLKKIVENKKEYADIVFRQLKALELVSLKSLNSFCRSRSLVFVFPSLEKLVVSACPKMKSFSSKVKSTPLLQKIYVVPENEQRWCWKDNLNATIRYIYKEKKFYEGMEDINVSEHPELQQTWYGKPFLQKNWFYSLKTLKLEDCNYQLCAIPSNILPCLKSLKELEVRGCERIEVIFDMNDTEIMGTASQLKKLTLERLPKLTRVWEKSSQVSVSFQNLQQVIVRDCENLETLFPAALAKNLMKLENLEIESGGLREIVENETVSEEVTKKLAFPCLMELRLLDLASLYPRTFTLECPALNSLLVCSCRNLELFQSAHLESESEGISTHKEPLFSDLKPFLSLYQAISNLEVLSLDWDETLRSRFGQSTENLIYLNELALNLYYFFEEEKLRFPFEILEKAPNVKVLRMCCCDNPKILLTQNPKIGEDRMLGHLEILSLNHITQLQSIVSESSSCLNTICERLRGLIVSNCPDLTTIVHPTSAVSFSHLRELEITECHGLNYLFTSSATKQLIHLEEITVEDCQTMKKIVETDDISGGVKFEQLDWIVINSLPSLECFYSGNDTLQLPSLIQVDILKCPKMETFSRGSIDAESLRGIRVDDDLVFYDDLDLFGGIKFQQ* 2051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01383 2050 SUPERFAMILY L domain-like 1558 2023 - -
Rops4g01383 2050 Coils Coil 27 61 - -
Rops4g01383 2050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 416 IPR027417 -
Rops4g01383 2050 PRINTS Disease resistance protein signature 182 197 - -
Rops4g01383 2050 PRINTS Disease resistance protein signature 351 365 - -
Rops4g01383 2050 PRINTS Disease resistance protein signature 253 267 - -
Rops4g01383 2050 PRINTS Disease resistance protein signature 624 640 - -
Rops4g01383 2050 Gene3D Ribonuclease Inhibitor 1069 1253 IPR032675 -
Rops4g01383 2050 Gene3D Ribonuclease Inhibitor 1548 1670 IPR032675 -
Rops4g01383 2050 Gene3D Ribonuclease Inhibitor 1764 1940 IPR032675 -
Rops4g01383 2050 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1079 1244 - -
Rops4g01383 2050 SUPERFAMILY RNI-like 1130 1411 - -
Rops4g01383 2050 Gene3D Ribonuclease Inhibitor 1257 1522 IPR032675 -
Rops4g01383 2050 Gene3D - 154 316 IPR027417 -
Rops4g01383 2050 Gene3D Ribonuclease Inhibitor 507 1035 IPR032675 -
Rops4g01383 2050 Gene3D - 317 401 IPR042197 -
Rops4g01383 2050 SUPERFAMILY L domain-like 475 913 - -
Rops4g01383 2050 SMART AAA_5 179 337 IPR003593 GO:0016887
Rops4g01383 2050 Pfam NB-ARC domain 168 387 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01383 Rops-Chr4 35792857 35801698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01383 180 620 WRKY Transcription Factor Family AT5G45050 22.692 4.69e-11 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01383 - - tpra:123891476 2328.13