Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01372 ATGAGCATGCAGGTGGTGGCGCAAAGAAGGTTCAACTCAATGGAACGTAAGCCTAGAATGTTGAAGGAGTTCCTGAATGAGAATTCAAATTCTTGTTCCTCAGGTGGGTTCAAATCACTTCCAAGAAAACCAAACAACAGCATCATAGAAAAAATGGAACTCAAGTCATATTCATCATCAAAATCAACATTTCAAACACTTGTAAACACAATAAGGAGCATCTCTTTCTTCACAAAATCGCCCTCCATGATTTCTCTTCCACGTAGCCTCTCAAGAAAACTATCGTCAAAAAGAAGAAGAAGAAGAAGAAGAAACCAAGCATCATGTAATGAAATCAAAATCAGCACCGTTAAAATCAAGGACATCTTACGGTGGAAATCGTTCCGGGACATGGTGGTGGAGAACCACCACCACCACCCTTCACTTCCGTCACCGTCGGAGTTTCACCGTTACACAACGGAATCCACCACCACCAACACCACCACCAGTGTTACTTGTAGTAGTAATAGTAGTTTTTGTGGCTCAAGCTTTAGTAGTGACGGTGATTTTTTTACTTCATGGGAAGCACAAAACGACGTCGTTGAAGCGGGTCAAAAGTTTTCGTTTTCACCCCTTGTTGTCGGCAAGGATTCGGTGGCGTCCCAGGAGGTTTTAACTTGCCAAGAAGATGAACAACACAGTCCAGTTTCAGTTCTTCAGATTGGAGAAGATGAATTTTCACCCTTTGATCAAAGCCTTGGCAATATTGAAAGGAGAAAACAAAAGTTCATACAAACAGTTCAGAAATTCGGGAGTCTGGCAAAATTTGACCTTGCAAACTTAGACCAATGTCTCTCATTGGATGACAACTCTGGCTATGATGAAGAATATGAAGATAGTGAGGAAGAAAAAATTGAACAAGAAGATTGGATTGAGGAAAAGGCAAAGCAGCTGCTACATTGTGTTAAAGCAAAAGGTTCATCAGTGCAAAGCTGTGAAGACTATTTCGATATAGTTCTGTTGGATTTTTTCAAGGAAGAACTAACTGGAAGTAGAAACCAAAATAGGAATGATAAGGAGTTTCAGTTGGAGATACTGAGAATAGCTGAGGATTGGATTAATGGTTCATTTGCTTTTGATGTAGGACATGTTAATAAGGATGCTTATATCAAGGACATGGATAGGAGAGGTCCGTGGACCAAGTTTGAGGAGGGGAAAGAAGAATTGGCTTTGGAGATGGAGACAGCTATATTGCATAGTTTGGTTGTTGATCTTCTGGAATTGGATGGTTAG 1272 0.4057 MSMQVVAQRRFNSMERKPRMLKEFLNENSNSCSSGGFKSLPRKPNNSIIEKMELKSYSSSKSTFQTLVNTIRSISFFTKSPSMISLPRSLSRKLSSKRRRRRRRNQASCNEIKISTVKIKDILRWKSFRDMVVENHHHHPSLPSPSEFHRYTTESTTTNTTTSVTCSSNSSFCGSSFSSDGDFFTSWEAQNDVVEAGQKFSFSPLVVGKDSVASQEVLTCQEDEQHSPVSVLQIGEDEFSPFDQSLGNIERRKQKFIQTVQKFGSLAKFDLANLDQCLSLDDNSGYDEEYEDSEEEKIEQEDWIEEKAKQLLHCVKAKGSSVQSCEDYFDIVLLDFFKEELTGSRNQNRNDKEFQLEILRIAEDWINGSFAFDVGHVNKDAYIKDMDRRGPWTKFEEGKEELALEMETAILHSLVVDLLELDG* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01372 423 MobiDBLite consensus disorder prediction 92 106 - -
Rops4g01372 423 MobiDBLite consensus disorder prediction 88 107 - -
Rops4g01372 423 PANTHER OS04G0572500 PROTEIN 10 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01372 Rops-Chr4 35654367 35657909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01372 14 417 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 31.364 6.45e-40 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01372 - - gmx:102661341 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01372 4 35654367 35657909 Rops4g01372 4 35654367 35657909 ECH