Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01363 ATGATCTTTAGGACACTCCTACTGTTCCTGGCCTTTATGGTGACAAATTCAGTTGCTCTCATGGACAAGCAGACATACATAATACACATGGACAAGACAAAAATCAAAGCCTTAGTTCATTCCCAAGACAGCACAAGACCCTGGTTTAAATCAGTCATTGATTTCATCTCTGAAGTTTCACTAGAAAAAGAAGAAGAGATAGCCCCTCAACTTCTTTATGCTTATGAAACCAGCATGTTTGGTTTTGCTGCCCAACTTTCCAATCAACAACTTGAATACTTGAACCAAGTGGATGGTTTCCTTTCAGCCATACCTGATGAATTGTTAACCCTCCACACAACATACACTCCACATTTTCTTGGCCTGCAAAATGGAAAAGGACTTTGGAGTGATCCTAACTTGGCCTCAGATGTGATCATAGGGGTCCTTGATACAGGAATATGGCCTGAACATATCAGTTTCCAAGACTCAGGTTTGTCCCCAGTACCCTCTCACTGGAAAGGTGCTTGTGAAAAAGGCACCAATTTCTCTCCCTCAAATTGTAACAAGAAGCTTATTGGTGCAAGAGTCTTCTTCAAAGGGTACGAAAAATTTGCTGGAAGAATCAATGAAACATTGGATTATCGTTCTCCTAGAGATTCTCAAGGGCATGGAACACACACAGCTTCAACTGCAGCTGGTAATATGGTGAATAATGCAAGCTTTTTGGGCTTGGCCAAAGGTTCAGCCAGTGGAATGAGGTATACCTCACGAATTGCAGCTTATAAAGTATGCTGGCGTTTTGGCTGTGCTAATTCTGATATATTGGCAGCTATGGATCAAGCTGTTGCTGATGGAGTTGATGTATTGTCACTCTCTTTAGGTGGTGCTGCCAAACCTTATTACAATGATAGTATTTCCATAGCCTCATTTGGAGCAACACAAAATGGAGTTTTTGTTTCTTGCTCTGCAGGCAATTCAGGTCCCTCTAAATCAACTGTTGGAAATGTTGCTCCATGGATCATGACTGTTGCTGCTAGCTACACTGACAGGAGCTTCCCAACAAAAGTGAAGCTTGGGAATGGAAAGATTTTTAAAGGGTCATCTTTATATCAAGGCAAGGGAACAAACCAATTGCCTCTTGTGTATGGTGGCAATTCTTCAAAAGCACAAAGGATCGCACAGTTTTGCACCAGAGGTTCACTTGATCCAAAGCTTGTCCATGGAAAAATAGTTGTTTGTGAAAGAGGAATAAATAGTAGAACTGAAAAGGGAGAAGTAGTTAAGATGGCAGGTGGGGTAGGAATGATATTACTCAACTCAGAAAATCAAGGAGAAGAGCTTATTTCTGATTCTCACATTTTGCCAGCCACTTCTTTAGGGGCCTCAGCAAGTAAAAAGATTAGAAGTTATATTCACTCAGCAAAAGCACCGATAGCTTCAATTTCCTTTATAGGGACAACGTATGGAGATCCTGCACCAGTTATGACAGCATTTTCTTCTAGAGGACCAAGTGCAGTGGGACCAGATGTGATTAAGCCAGATATAACTGCACCTGGTTTGAACATCTTGGCTGCTTGGCCACCCAAAACTAGTCCAAGCATGCTCAAGAGTGACAAAAGAAGTGTACTATTTAACATAGTCTCAGGTACATCAATGTCATGTCCTCATGCTAGTGGCATAGCTGCATTGCTTAAATCTGTGCATAAGGATTGGTCACCTGCAGCTATCAAATCAGCTTTGATGACTACAGCTTACCAATTGAATAACAAAGGTGCTCCAATTGCTGACATTGGCTCAAATAACTCAGCAGCTAACTCTTTTGCATTTGGTTCAGGCCATGTTAACCCAGAAAGAGCTTCTGATCCAGGGTTAGTCTATGATATCACCACCAAAGACTACTTAAATTACTTGTGCAGCTTGAACTATACCTCTTCTCAGATTGCTTTATTATCAAAAGGTAACTTTAAATGTTCCAAAAAGTCAGTTCTTCAAGCTGGTGACTTGAACTACCCTTCTTTTGCTGTGCTATTTAGCAGAAGTGCTCTAAATGCTAGTGTGACATACAAGAGGGTAGTCACAAATGTAGGAAATCCAAGAAGTTCATATGCAGTGAAAGTGGAAGCACCAAAGGGAGTATCAGTGATGGTTGAACCAAGGAATTTGAGTTTTAGTAAACTTGGTCAGAAATTGAGTTACAAAGTGATTTTTGTTGCATATGGAGGAGCAACAGTTAGTGGTAGTTCATCATTTGGGTCACTTACTTGGGTATCAGGGAAATATATTGTTAGAAGTCCCATAGCAGTGACCTGGCTATAA 2298 0.4086 MIFRTLLLFLAFMVTNSVALMDKQTYIIHMDKTKIKALVHSQDSTRPWFKSVIDFISEVSLEKEEEIAPQLLYAYETSMFGFAAQLSNQQLEYLNQVDGFLSAIPDELLTLHTTYTPHFLGLQNGKGLWSDPNLASDVIIGVLDTGIWPEHISFQDSGLSPVPSHWKGACEKGTNFSPSNCNKKLIGARVFFKGYEKFAGRINETLDYRSPRDSQGHGTHTASTAAGNMVNNASFLGLAKGSASGMRYTSRIAAYKVCWRFGCANSDILAAMDQAVADGVDVLSLSLGGAAKPYYNDSISIASFGATQNGVFVSCSAGNSGPSKSTVGNVAPWIMTVAASYTDRSFPTKVKLGNGKIFKGSSLYQGKGTNQLPLVYGGNSSKAQRIAQFCTRGSLDPKLVHGKIVVCERGINSRTEKGEVVKMAGGVGMILLNSENQGEELISDSHILPATSLGASASKKIRSYIHSAKAPIASISFIGTTYGDPAPVMTAFSSRGPSAVGPDVIKPDITAPGLNILAAWPPKTSPSMLKSDKRSVLFNIVSGTSMSCPHASGIAALLKSVHKDWSPAAIKSALMTTAYQLNNKGAPIADIGSNNSAANSFAFGSGHVNPERASDPGLVYDITTKDYLNYLCSLNYTSSQIALLSKGNFKCSKKSVLQAGDLNYPSFAVLFSRSALNASVTYKRVVTNVGNPRSSYAVKVEAPKGVSVMVEPRNLSFSKLGQKLSYKVIFVAYGGATVSGSSSFGSLTWVSGKYIVRSPIAVTWL* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01363 765 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Rops4g01363 765 PRINTS Subtilisin serine protease family (S8) signature 542 558 IPR015500 -
Rops4g01363 765 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Rops4g01363 765 Gene3D - 631 764 - -
Rops4g01363 765 Pfam Subtilase family 136 592 IPR000209 GO:0006508|GO:0008236
Rops4g01363 765 Pfam Peptidase inhibitor I9 25 112 IPR010259 -
Rops4g01363 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 112 IPR037045 -
Rops4g01363 765 FunFam subtilisin-like protease SBT1.5 343 482 - -
Rops4g01363 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 543 553 IPR023828 -
Rops4g01363 765 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 140 151 IPR023827 -
Rops4g01363 765 Pfam Fibronectin type-III domain 661 762 IPR041469 -
Rops4g01363 765 CDD Peptidases_S8_3 109 579 IPR034197 -
Rops4g01363 765 Gene3D Peptidase S8/S53 domain 137 627 IPR036852 GO:0004252|GO:0006508
Rops4g01363 765 Pfam PA domain 373 459 IPR003137 -
Rops4g01363 765 SUPERFAMILY Subtilisin-like 111 618 IPR036852 GO:0004252|GO:0006508
Rops4g01363 765 CDD PA_subtilisin_like 350 475 - -
Rops4g01363 765 Gene3D - 343 482 - -
Rops4g01363 765 ProSiteProfiles Serine proteases, subtilase domain profile. 114 614 - -
Rops4g01363 765 FunFam Subtilisin-like protease SBT1.5 137 355 - -
Rops4g01363 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 762 IPR045051 -
Rops4g01363 765 FunFam Subtilisin-like protease SBT1.5 631 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01363 Rops-Chr4 35546066 35548363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01363 23 764 Subtilisin-like Serine Gene Family AT1G01900 57.047 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01363 - - gmx:100817581 1316.98