Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01362 ATGAGCAGTGTTTCAGTTGATGGTGTAGAACAAAAGAACTTTTACATTGTTTTCCTGGGGGCTGATCCTGTGAGTAGAGACATAGCACTAGAGACCCATTTAAATGTTCTCTCAACTGTTAAAGGAAGCCACCTTGAAGCCAAAGAATCCTTGGTATACAGCTACACAAAGAGCTTTAATGCATTTGCTGCTAAACTTTCTGAGGATGAAGCCAATAAGTTATCTGCCATGGATGAAGTGCTTTCAGTGATTCCAAATCAGTACCGCAAGCTACATACAACAAGATCATGGGACTTTATTGGATTACCTTTGACTGCTAAGAGAAAAATGAAATCAGAAAGTGACACAATTGTGGCTCTTTTGGATACAGGGATTACTCCTGAATTTCATAGCTTCAAGGATGATGGATTTGGTCCACCACCTGCTAAATGGAAAGGAACTTGTGACCAATATGCTAATTTCTCAGGCTGCAATAACAAGATCATAGGAGCCAAATACTTCAAGATTGATGGAAAGCCTGATCCATCTGAAATATTATCTCCCATAGATGTGGATGGCCATGGAACTCACACATCATCAACAGCAGCAGGCAATCTTGTCCCAAATGCAAGTCTCTTTGGATTAGCCAAAGGGACTGCTCGTGGTGCAGTGCCTTCAGCAAGGTTGGCAATTTACAAAGTATGTTGGACAAATGATGGATGTGCAGACATGGACATACTTGCTGCATTTGAAGCTGCTATACATGATGGTGTGGATGTCATATCAATTTCCATAGGTGGAGGGAATGCAAATTATGTGCAGGACTGTATAGCAATTGGAGCATTTCATGCTATGAGGAAAGGAATAATCACTGTGGCCTCAGCAGGAAATGATGGTCCATCTATGTCAACAATCACAAATAATGCACCATGGATTGTAACAGTGGCTGCTAGCGGTATTGATAGGGATTTCCGGAGCACTATAGAATTGGGGAATGGAAAAAATGTTTCTGGAACAGGAGTGAGCACCTCTAATACAAAACAAAAACAGTATCCCTTTGTTAATGGGATGGATGCAGCCCGATCTGGAAATGAAAATGCCAAATTCTGCTTGGAAGACACCTTAGAGCCAAATAAGGTGAAAGGAAAGCTTGTTTATTGTATATTAAATACATGGGGCACTGACTCTGTTGTTAAGGAAATTGGAGGCATTGGTACTATACTTGAATTAGAGCAATCTCTCGATGTTGCTCAAATATTCATGGCTCCTGCTACCATTGTGAACAGTAGCACAAGTCAAATTATTACCAATTATATACACTCCACAAGATCACCATCAGCAATGCTACATAAGAGCCATGAAGTAAAAATACCAGCTCCATTTGTTGCTTCATTTTCATCTAGGGGTCCAAATCCAGGATCCAAACATGTTCTCAAGCCTGATATTACAGCTCCTGGCATTAACATCTTGGCATCTTATACACTTAGGAAGTCAATTACTGGTTTGAAAGGAGATACTCAATTTTCAGAATTTACACTAATGTCTGGGACTTCTATGTCATGCCCTCATGTTTCTGGAGTAGCAGCATATGTGAAGTCATTTCACCCAGGTTGGACTCCTGCTGCAATCAGATCTGCCATTATTACCACAGCTAAACCTATGAGCCAAAAAGTTAACAAGGAGGCAGAATTTGCCTTTGGTGCTGGTCAAGTGAACCCAACAAGAGCAGTGAACCCTGGTTTAGTATATGACATGGATGACTTTGCTTATGTCCAGTTCTTATGCCATGAAGGCTATAATGGTTCCAAATTGTCTGTATTAGTTGGTTCTCCGGTAAATTGCACTTCTTTGATTCCTGGACTTGGCCATGATGCTATCAACTATCCTAGCATGAAACTAAGTGTGAAAAGCAACACAGACACAACAGTAGGAGTTTTCAGGAGAAGGGTGACCAATGTAGGTCCTGCACCAACCATCTACAATGCCACCATTAAAGCTCCCAAAGGAGTTGAAATCACAGTGAAGCCTACTAGCCTCATTTTCTCTCACACCATGCAGAAGAGAAGCTTCAAAGTAGTAGTGAAAGCAAAATCTATGAAAAGCATGAAAATGGTATCAGTGACTCAAATTCTTGGAAACATGGACATGATTTCTCAGTTGCCAGAACCCATTATTCATGACATACTCTCTTATCTCCCCAACAAAGACTCTGCAAGAACTTGTGTCCTCTCCAAAACTTGGAGACACTTGCATGCTACCAAACCCATCATGGTTTTCAATCACTTTGAGTTTGATCCACAAGTATATGGCCATCGTTTTATATCAAATAGAAGGAGGAGAAAGTTCCTTTTGGATGGGAAATACTCAAGGAAGAAAGAGTTATTCATGAACTATGTGGAGAGTTCTTTGAAGCGTTTCTTTCATCAACAACAACAACAGTGCTCAAGACTAAGAAAATTTGATTTAACATACTGCACTTATGATGAAAATGGAAGAGATTTTGGTCGCATAGACCAATGGTTACATGATGTGATTCATAATGGAACTGATACTTTATGTCTTAACATAATATCATATCATGATGATCCTTACCCTTTGCCTCATTTTGTTCTTGCTTCTCAGATGCTGCATGAACTGTGCTTATCTGGTTCCATTTTGCTGGATGCTTGCAGAGATATCAGTCTTCCTTCTCTAAGGGTATTGTCCCTTTGTAATGTTGATAATGTCAATGATGATTTGGTCAAACATTTATTCTCAGGTTGTTCTTTTGTGGAGATTTTGAGGATCAAAGATTGCCAAAAGTTAGTTGATCTTCAAGCTTCAAATCTTGCAAGGCTTGTAGAACTTTCCTTAGATCGCTGCAGCTTTGTTAGAATGGTTGAAATTGGTTCACTAAATCTTCAATCTTTCTCTTATTCTTGTAGCAAAATCCCACCTAACATTACATTACGTGGAGCTTCTAAGACTCTAAGAAAGTTGAAGCTGGAAACCTGTGGTATTGGACCTCAGAGTCCATTTCATCAGGTATCTACATTCATTCAGCTTGAGGAATTGGTTCTTGAATATATAGATTCTGGGAAAGTCCCTGAGATGAGGGTTTCAAGCCAAAGTCTCAAGAGGTTGGTCATCAGAAACTTGCTCAACATGAAGGAGGTGGTAGAGATTGAATGTCCAAATCTGCATGCATTGGAATATACATCCAACATATTGCCATTCCATTCTCTGAGCCCTTTAAATCCAAAACATTTTAGACTTGAATTCCACCTTCTTGTATCCCAGCATGTTATTTGGTTGGATGCACTGAAGATATTATTTGAAAATGGTTTTAGTACTACCAAATATCCTAAGGTCTTTATTGTTTTGAAAGACCATAAGGAAGTGATAATTCTGGACCTGGATGGTGGGTTGATTGAAGTGATGCTCTCTTTTCTTTGTCAAGTTGAGGATTTGGAGTCTACATCAAGAATAATTATAGCATCGAGTTCTGTTAATTTGAAGAATGAAATTTTGACTCCTATGCCTCCCCATATGGCTTTCAATATAGTATCATCTTGTACCAGCAACTTCACACAGATCTTTTCAGAAAAATTATCAAGATTATTAGAGTCTTGTGGCTGCATTGTTGAGAAGGATACTACCACTCCATGA 3627 0.3934 MSSVSVDGVEQKNFYIVFLGADPVSRDIALETHLNVLSTVKGSHLEAKESLVYSYTKSFNAFAAKLSEDEANKLSAMDEVLSVIPNQYRKLHTTRSWDFIGLPLTAKRKMKSESDTIVALLDTGITPEFHSFKDDGFGPPPAKWKGTCDQYANFSGCNNKIIGAKYFKIDGKPDPSEILSPIDVDGHGTHTSSTAAGNLVPNASLFGLAKGTARGAVPSARLAIYKVCWTNDGCADMDILAAFEAAIHDGVDVISISIGGGNANYVQDCIAIGAFHAMRKGIITVASAGNDGPSMSTITNNAPWIVTVAASGIDRDFRSTIELGNGKNVSGTGVSTSNTKQKQYPFVNGMDAARSGNENAKFCLEDTLEPNKVKGKLVYCILNTWGTDSVVKEIGGIGTILELEQSLDVAQIFMAPATIVNSSTSQIITNYIHSTRSPSAMLHKSHEVKIPAPFVASFSSRGPNPGSKHVLKPDITAPGINILASYTLRKSITGLKGDTQFSEFTLMSGTSMSCPHVSGVAAYVKSFHPGWTPAAIRSAIITTAKPMSQKVNKEAEFAFGAGQVNPTRAVNPGLVYDMDDFAYVQFLCHEGYNGSKLSVLVGSPVNCTSLIPGLGHDAINYPSMKLSVKSNTDTTVGVFRRRVTNVGPAPTIYNATIKAPKGVEITVKPTSLIFSHTMQKRSFKVVVKAKSMKSMKMVSVTQILGNMDMISQLPEPIIHDILSYLPNKDSARTCVLSKTWRHLHATKPIMVFNHFEFDPQVYGHRFISNRRRRKFLLDGKYSRKKELFMNYVESSLKRFFHQQQQQCSRLRKFDLTYCTYDENGRDFGRIDQWLHDVIHNGTDTLCLNIISYHDDPYPLPHFVLASQMLHELCLSGSILLDACRDISLPSLRVLSLCNVDNVNDDLVKHLFSGCSFVEILRIKDCQKLVDLQASNLARLVELSLDRCSFVRMVEIGSLNLQSFSYSCSKIPPNITLRGASKTLRKLKLETCGIGPQSPFHQVSTFIQLEELVLEYIDSGKVPEMRVSSQSLKRLVIRNLLNMKEVVEIECPNLHALEYTSNILPFHSLSPLNPKHFRLEFHLLVSQHVIWLDALKILFENGFSTTKYPKVFIVLKDHKEVIILDLDGGLIEVMLSFLCQVEDLESTSRIIIASSSVNLKNEILTPMPPHMAFNIVSSCTSNFTQIFSEKLSRLLESCGCIVEKDTTTP* 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01362 1208 Gene3D - 587 709 - -
Rops4g01362 1208 CDD PA_subtilisin_like 320 440 - -
Rops4g01362 1208 Gene3D Peptidase S8/S53 domain 115 580 IPR036852 GO:0004252|GO:0006508
Rops4g01362 1208 Pfam Fibronectin type-III domain 619 698 IPR041469 -
Rops4g01362 1208 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 46 735 IPR045051 -
Rops4g01362 1208 ProSitePatterns Serine proteases, subtilase family, serine active site. 509 519 IPR023828 -
Rops4g01362 1208 Pfam Subtilase family 114 562 IPR000209 GO:0006508|GO:0008236
Rops4g01362 1208 Gene3D - 314 448 - -
Rops4g01362 1208 FunFam Subtilisin-like protease SBT5.3 4 92 - -
Rops4g01362 1208 Gene3D Ribonuclease Inhibitor 780 1089 IPR032675 -
Rops4g01362 1208 Pfam F-box domain 710 743 IPR001810 GO:0005515
Rops4g01362 1208 ProSiteProfiles Serine proteases, subtilase domain profile. 96 570 - -
Rops4g01362 1208 ProSiteProfiles F-box domain profile. 707 755 IPR001810 GO:0005515
Rops4g01362 1208 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 92 IPR037045 -
Rops4g01362 1208 CDD Peptidases_S8_3 90 544 IPR034197 -
Rops4g01362 1208 SUPERFAMILY F-box domain 706 758 IPR036047 GO:0005515
Rops4g01362 1208 CDD F-box_AtFBL13-like 710 743 - -
Rops4g01362 1208 PRINTS Subtilisin serine protease family (S8) signature 113 132 IPR015500 -
Rops4g01362 1208 PRINTS Subtilisin serine protease family (S8) signature 508 524 IPR015500 -
Rops4g01362 1208 PRINTS Subtilisin serine protease family (S8) signature 183 196 IPR015500 -
Rops4g01362 1208 SUPERFAMILY Subtilisin-like 91 574 IPR036852 GO:0004252|GO:0006508
Rops4g01362 1208 FunFam Subtilisin-like protease SBT1.5 115 327 - -
Rops4g01362 1208 SUPERFAMILY RNI-like 805 1047 - -
Rops4g01362 1208 Pfam Peptidase inhibitor I9 15 92 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01362 Rops-Chr4 35527470 35537654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01362 4 558 Subtilisin-like Serine Gene Family AT4G00230 64.093 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01362 - - ccaj:109800351 1203.73