Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01360 ATGAGAATCATGCCAGGGACAATTGAACGATACCGCAGGCATACAGGGGATCGTACTCCAACTACATTTGTATCAGTTGAACAAAATATGCAGCATTTGAAGCAAGAAGCAGCAAGCATGATCAAGAAGATTGACCAACTTGAAGCTTCAAAACGGAAACTCATGGGAGATGGTTTGGGATCTTGTTCCATTGAGGAACTGCAACAGATAGAACAACAGTTGGAAAGGAGTATAAGCCGTATTAGAGCTAGAAAGACTCAAGTTTTCAGGGAACAAATTGAGCAACTAAAAGAAAAGGAAAAAGCCCTAGTTGCTGAAAATTCCAGGCTCTCTGAGAAGTATGGTATCCGTCCACGGCTAGCAACAAATGATCAGATAGAAAATCAACCCCAACCCTATGTAGAAAGTAGTCCAAGTTCAGATGTGGAGACTGAATTGTTCATTGGACTTCCAGAAGCAAGAACAAGGCGCATTTCTCCTCAAGTCTAG 489 0.4192 MRIMPGTIERYRRHTGDRTPTTFVSVEQNMQHLKQEAASMIKKIDQLEASKRKLMGDGLGSCSIEELQQIEQQLERSISRIRARKTQVFREQIEQLKEKEKALVAENSRLSEKYGIRPRLATNDQIENQPQPYVESSPSSDVETELFIGLPEARTRRISPQV* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01360 162 MobiDBLite consensus disorder prediction 122 141 - -
Rops4g01360 162 Pfam K-box region 27 114 IPR002487 GO:0003700|GO:0005634|GO:0006355
Rops4g01360 162 Coils Coil 86 113 - -
Rops4g01360 162 Coils Coil 30 50 - -
Rops4g01360 162 Coils Coil 64 84 - -
Rops4g01360 162 ProSiteProfiles K-box domain profile. 30 120 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01360 Rops-Chr4 35419369 35423886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01360 4 101 MADS-box Gene Family AT2G45660 73.469 2.36e-44 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01360 - - lja:Lj0g3v0285839.1 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01360 4 35419369 35423886 Rops4g01360 4 35419369 35423886 ECH