Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01350 ATGGCCAAATTTGATCCATACAGCCACTTTGGCTTGACTCTCAACCCCGACGGAACCCTAACCCGTGGCTGCAACATTCCAACGGTGGAGGCGAATCCCGAACCCATTCCGGGAAAATCTGCAGTCTCCAAAGACATAACTATCAATGAAGAAAATCATGTATGGGTTCGAATTTATAGGCCAACGAAGCTTCCTTCCAATGACAACACTGTGGCACGTCTACCCATTGTGTTTTTCTTTCCCACCGGAGGATTTATCCTCCTCGACCCCGCCGACCTCAGTATGCATGGAAATTGCATGCGACTCGCCGGCGAGGCCCCTGCCATTGTGGTCTCTGTGGCTTTCCGCCATGCGCCAGAGAGCCGCCTTCCGACACAATACTACGATGCCCGTGATGCCATATTGTGGGTGAGGAAACAAATTACTGATCCTAATGGTGAGCAATGGTTGAGAGACTATGGTGACCCTTCGAGGTGCTACCTTTATGGAACTGGCAGTGGTGGGAATATAGTGTTCAACACTGCCATGCTAGTTGCTGATATGGACTTGGAGCCTGTGAGGATATGTGGGGTGATCATGAACCAACCCATGTTTGGAGGAGAGAAAAGGAAGGCTTCTGAATTGAGGTTTGCTACAGACCAGACTTTGCCCTTGCCTGTGTTGGACATGATGTGGGAGCTGGCTTTGCCTAAGGAGACAGATCGTGATCATAGGTATTGCAATCCCACGGTGAATGGGCCACACTTGGAGAATGTGAAGAAGTTGGGGAGGTGCCTCGTTATTGGGTATGGCATGGACATCATGGTGGACCGGCAACAAGAGCTTGTGACCTTGTTGGTCAAGTGTGGGGTGAATGTGGAAGCTCGGTTTGATCCCGTAGGGTTCCACAATATTGACATGGTGGACCCTTCCAGGGCTAATGCAGTTTTAAACATTGTCAAGGATTTTATTGTTTGA 957 0.4963 MAKFDPYSHFGLTLNPDGTLTRGCNIPTVEANPEPIPGKSAVSKDITINEENHVWVRIYRPTKLPSNDNTVARLPIVFFFPTGGFILLDPADLSMHGNCMRLAGEAPAIVVSVAFRHAPESRLPTQYYDARDAILWVRKQITDPNGEQWLRDYGDPSRCYLYGTGSGGNIVFNTAMLVADMDLEPVRICGVIMNQPMFGGEKRKASELRFATDQTLPLPVLDMMWELALPKETDRDHRYCNPTVNGPHLENVKKLGRCLVIGYGMDIMVDRQQELVTLLVKCGVNVEARFDPVGFHNIDMVDPSRANAVLNIVKDFIV* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01350 318 Pfam alpha/beta hydrolase fold 78 297 IPR013094 GO:0016787
Rops4g01350 318 SUPERFAMILY alpha/beta-Hydrolases 26 307 IPR029058 -
Rops4g01350 318 PANTHER ARYLACETAMIDE DEACETYLASE 22 297 - -
Rops4g01350 318 Gene3D alpha/beta hydrolase 8 318 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01350 Rops-Chr4 35182384 35184305 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01350 17 275 Carbohydrate Esterase AT1G68620 32.061 4.53e-37 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01350 - - ccaj:109802332 472.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01350 4 35182384 35184305 Rops4g01350 4 35182384 35184305 ECH