Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01349 ATGGCAGAACCACCACCACCTTCCACCATAGACCCCTACGAATTCCTCAAAATCAAACTCAACCCAGACGGAACGCTAACCCGAAACTACGTCGTTCCAACCCTTCCCCCAAACCCCAACAACAACTCATCCCTCTCCAAAGACATTCCCCTCAACCCCTCCACCAAAACCTCCCTCCGCCTCTTCTTCCCCCACCCTCCGCCCCCACCCTCCGTCAAACTCCCTCTCATCATTTACTTCCACGGCGGCGGTTTCATCCTCTACCACCCTTCCTCCCTCTTCTTCCACCAATCCTGCACCTCCATCTCCGCCGCCATCCCCGCCATCATCGCCTCCGTCGACTACCGTCTCTCGCCTGAGCACCGCCTCCCCGCCCCCTACGACGACGCCGTCGACGCCATCCTCTGGGTCCGAACCCAAGCCCTCGACCCGACCCGATCCGACCCGTGGATTAAAGACCATGCTGATTTCTCAAAGTGCTTCTTAATGGGAAGCAGTTCAGGGGGAAATATCGCATACTTCGCGGGTCTACGTGCACTCGACCTCGATCTTGATCCTGTTAAGATCCAAGGGTTGATAATGAACGTCCCTTATTTTAGTGGGACCCAGAGGTCAAACTCGGAGTTGCGTTTGGTCAACGATCGCATATTACCTTTACCGGCGAATGATCTTATGTGGGCCTTGTCGTTGCCTGAGGGTTCAGATCGTGACCACCTGTACTGCAATCCGACGGTCGTGGATGGGGTTTATGGTGAGAAGATCGGACGGTTGCCGAGGTGTTTCATCAACGGCTATGGTGGGGATCCCTTGGTGGATAAGCAGAGGGAGTTTGTGAAGATTTTGGAGGCACGTGGGGTGCACGTGGAGTCTCATTTTGATGATGATGGGTTTCATGCTGTGGAGATCTTTGACAAAGCAAAGGCACAAGCTTTGATTGATAACATCAAGAAGTTTATACTCTCAGCTACTACTCAATCCCCAATGTGA 987 0.535 MAEPPPPSTIDPYEFLKIKLNPDGTLTRNYVVPTLPPNPNNNSSLSKDIPLNPSTKTSLRLFFPHPPPPPSVKLPLIIYFHGGGFILYHPSSLFFHQSCTSISAAIPAIIASVDYRLSPEHRLPAPYDDAVDAILWVRTQALDPTRSDPWIKDHADFSKCFLMGSSSGGNIAYFAGLRALDLDLDPVKIQGLIMNVPYFSGTQRSNSELRLVNDRILPLPANDLMWALSLPEGSDRDHLYCNPTVVDGVYGEKIGRLPRCFINGYGGDPLVDKQREFVKILEARGVHVESHFDDDGFHAVEIFDKAKAQALIDNIKKFILSATTQSPM* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01349 328 Pfam alpha/beta hydrolase fold 77 300 IPR013094 GO:0016787
Rops4g01349 328 SUPERFAMILY alpha/beta-Hydrolases 30 319 IPR029058 -
Rops4g01349 328 PANTHER ARYLACETAMIDE DEACETYLASE 19 300 - -
Rops4g01349 328 Gene3D alpha/beta hydrolase 13 326 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01349 Rops-Chr4 35173061 35174366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01349 10 243 Carbohydrate Esterase AT1G68620 39.076 3.53e-49 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01349 - - gmx:100814398 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01349 4 35173061 35174366 Rops4g01349 4 35173061 35174366 ECH