Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01348 ATGTTAATCGGCGGAGTAATCGCGGCGGCGGTGTTCTTATTAGCGGTTATGATTTCCGCGGTAATCTTCATTTACCGGAAGCTCTCTTACAACCGTACGGCACCGTTCGAGCACAGTCACCGGCGATTCTCGTACTCCGTGCTCCGCCGCGCGACGAACTCGTTCTCGCCGTCTACGAAGCTAGGTCACGGTGGTTTCGGTTCGGTTCACAAAGCAACGTTACCATCGGGTCAGAGCGTGGCGTTGAAGGTAATGGACTCGCCAGGTTCGATCCAAGGAGAGAGAGAGTTCCATAATGAACTTTCTCTCTGTTCGAATCTTCGGTCTCCTTTTATACTCTCACTTCTCGGTTTTTCTTCGGACCGGCGCGGTCGAAAGCTCGTTTTGGTTTACGAGCTTATGCCGAACCGGAGTTTGCAAGACGCGCTTTTGGACCGGCGTTGCCCTGAGCTTATGTGTTGGGCGAACCGGTTCAACGTCGCCGTTTCGGTGGCAAAGGGATTAGAGTATCTTCACCATCATTGTGATCCACCAGTGATCCATGGAGATATTAAGCCTAGTAATGTGTTACTGGATCGTGAGTTTAGGGCTAAGATTGGGGATTTTGGGCTTGCTAGAGTGAAGAGTGTGGAAGATTCTGGAATGGGGATGGTGGAGGAGAAGAAGAAAGAAGGAGTTGAGGATTGTTGTAGTTCTGTTGTTTCTGTTATGGAGGAAGTTGAGAGTGTGGTGACTAATACTACTGCTGGGTTTGATGTTGATCGGTCGCCGGAGAGTTGTACGGTGAGGGTCTTGGATTACGAGGCTTCGCCGGAGATGGCGTCGGCGGGGGTGGTGTCGCCGGAGATGGTGGGGTTGGAGAAAGCGAGTGTGGTGTCTGATGGGTGTCTTGATAAGTTCAGTGTTGATAGTGGGAATCAGAGGAAAAAAGGTGGTTCAGGGAGGGATTGGTGGTGGAAGCAGGAGAATGGAGGAGGGTCTGAATCTGGGAGGGTGAAGGATTATGTGATGGAGTGGATTGGGAGTGAGATAAAGAAGGAGAGACCCAAAAGTCGGTGGGTTGATTCTGGTTCTTCTCCTTGTTCTGGAGGAGAAAGTGGAGTTGTTAAGGTGGAGGCAAAGAAGAAGCAGAGAAAGAAGTTGGATTGGTGGGCTTCTCTTGATGAGGAGAAGGTTAAGGTGAAGAAGAATCGGAAGCCGAGGGAGTGGTGGAAGGAGGAGTTTTGTGAGGAGCTTGCAAAGAAGAGTAGGAAGAAAAAGAGGAGTCTTGATTGTAATGGTGGGGAATCATGGTGGCTGAGAGATGAGGATGGTGTGGAGAAGAAGAAGAAGAGGAAGAGTAAGATGAGCAGAGGGAGTATTGATTGGTGGTTGGATGGTTTGAGTGGGGAGCTTAGGAATGGAGGAAGGAGGAATAGTCAAGATTGGGTTAGTGGGGATATACCAAAGAGTGGTGGAATCAGCAGCACACCAAGTATGAGGGGAACTGTTTGTTACATCGCCCCTGAGTATGGTGGTGGTGGGCAGTTATCTGAAAAATGTGATGTGTATAGTTTTGGGGTTCTGCTTTTGGTTTTGGTTGCTGGTAGAAGGCCACTTCAAGTGACAGCTTCACCAATTTCAGAATTTGAGAGGGCCAATCTCATTTCATGGGCTAGGCAACTTGCTCATAATGGGAGGCTTTTGGATCTTGTTGACCCTTCGGTTCATTCATTGGACAAGGAGCAGGCACTGCTCTGCATCACCATTGCCTTGTTGTGTCTGCAGAGATCACCAGGAAAAAGGCCTTCCATGAAAGAGATTGTGGGGATGCTTTCTGGTGAGGCTGAACCACCTCACTTGCCATTTGAGTTCTCACCATCACCGCCCTCTAATTTCCTGTTCAAGTCCCGGAAGAAGGCTCGGTGA 1908 0.4953 MLIGGVIAAAVFLLAVMISAVIFIYRKLSYNRTAPFEHSHRRFSYSVLRRATNSFSPSTKLGHGGFGSVHKATLPSGQSVALKVMDSPGSIQGEREFHNELSLCSNLRSPFILSLLGFSSDRRGRKLVLVYELMPNRSLQDALLDRRCPELMCWANRFNVAVSVAKGLEYLHHHCDPPVIHGDIKPSNVLLDREFRAKIGDFGLARVKSVEDSGMGMVEEKKKEGVEDCCSSVVSVMEEVESVVTNTTAGFDVDRSPESCTVRVLDYEASPEMASAGVVSPEMVGLEKASVVSDGCLDKFSVDSGNQRKKGGSGRDWWWKQENGGGSESGRVKDYVMEWIGSEIKKERPKSRWVDSGSSPCSGGESGVVKVEAKKKQRKKLDWWASLDEEKVKVKKNRKPREWWKEEFCEELAKKSRKKKRSLDCNGGESWWLRDEDGVEKKKKRKSKMSRGSIDWWLDGLSGELRNGGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDPSVHSLDKEQALLCITIALLCLQRSPGKRPSMKEIVGMLSGEAEPPHLPFEFSPSPPSNFLFKSRKKAR* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01348 635 PANTHER OS07G0586332 PROTEIN 8 635 IPR044576 -
Rops4g01348 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Rops4g01348 635 SMART serkin_6 55 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01348 635 MobiDBLite consensus disorder prediction 613 635 - -
Rops4g01348 635 ProSiteProfiles Protein kinase domain profile. 55 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01348 635 Gene3D Phosphorylase Kinase; domain 1 19 133 - -
Rops4g01348 635 Pfam Protein kinase domain 58 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01348 635 Pfam Protein kinase domain 490 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01348 635 SUPERFAMILY Protein kinase-like (PK-like) 29 623 IPR011009 -
Rops4g01348 635 ProSitePatterns Protein kinases ATP-binding region signature. 61 83 IPR017441 GO:0005524
Rops4g01348 635 MobiDBLite consensus disorder prediction 303 328 - -
Rops4g01348 635 MobiDBLite consensus disorder prediction 350 371 - -
Rops4g01348 635 FunFam Os07g0541700 protein 134 221 - -
Rops4g01348 635 Gene3D Transferase(Phosphotransferase) domain 1 466 611 - -
Rops4g01348 635 Gene3D Transferase(Phosphotransferase) domain 1 134 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01348 Rops-Chr4 35159847 35162061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01348 483 605 Receptor kinase-like Gene Family AT3G58690 37.209 4.54e-15 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Rops4g01348 Pkinase 7.6e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01348 - - gmx:100814933 908.672