Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01337 ATGGGGAGAGATTCAAGTATTTGGGAAAGGCCAGTGAGATTTATTTATCAATTTACGCCTGAAAGATTCCTAGACAGTGAGATTGATTTTAAAGGCCAGGATTTTGAGTTGATTCCCTTTGGAGCTGGAAGAAGGATCTGTCCTGGATTGCCATTGGCTTATAGGACTATACACATTGTGTTGGCCTCTCTTCTATGTGACTATGATTGGAAGCTCACGAGTGGGAAAATGCCAGAGAACATCGATATGTCTGAGAAATTTGGAATTTCCTTGCATAAGGCGCAACCTCTCCAAGTCATTCCTGTCCAAGCATAA 315 0.419 MGRDSSIWERPVRFIYQFTPERFLDSEIDFKGQDFELIPFGAGRRICPGLPLAYRTIHIVLASLLCDYDWKLTSGKMPENIDMSEKFGISLHKAQPLQVIPVQA* 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01337 104 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 40 49 IPR017972 GO:0005506|GO:0016705
Rops4g01337 104 PRINTS E-class P450 group I signature 37 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01337 104 PRINTS E-class P450 group I signature 47 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01337 104 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 103 - -
Rops4g01337 104 Pfam Cytochrome P450 1 92 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01337 104 SUPERFAMILY Cytochrome P450 1 101 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01337 104 Gene3D Cytochrome P450 1 102 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01337 Rops-Chr4 34956311 34956625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01337 1 103 Cytochrome P450 AT1G33720 55.340 2.63e-39 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01337 - K20556 gmx:100809483 166.777