Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01333 ATGACCATGGATTCCCTTGTACTTCTCTTTCTAATTTCGTTTGTGTGCATAAGCATTCATATCCTCATCTCAAACTTAGGGATCAAAACACCAAAATCCTCCAAATACCCTCCAGGGCCTCACCCTTTTCCAATCATAGGAAATATCTTGCAACTTAGCAGCTTGCCTCACCAGGCACTTGCCAAACTTTCCCAAATTCATGGACCTGTAATGAGACTGAAGCTTGGTAGCACAACCACCATAGTCATTTCCTCTCCACAAGTTGCCAAAGAAGTACTCCATAAAAATGACCATATCTTCTCTAACAGGAAAGTCCCTGATAGTGCCCGAGCACTTGACCACCACAAACTTTCAGTGGGATGGACACCAACTTCAGATCAGTGGAGGATCCTCAGGAGATTTTGTGCCACCCAATTATTCTCTACCAAAAAGCTTGACTCTACACAAGTTCTTCGTCAAAGGAAGGTGCAAGAGTTGCTGGATTATGTAAAGGAAAGCTGCAAGAAAGGACAAGCTTTGGATATTGGTGAGGCTTCCTTTACAACCATGCTTAATTCCATATCAAACACTTTATTCTCTATGGATTTGGCTCATTACACTTCTGATAAGTCTCAAGAGTTCAAGGACATCATTTGGGGTATCATGGAAGAAGTTGGAAAGCCCAATGTTGTGGACTTCTTCCCAATCTTTCGCCTGCTTGATCCACAAGGTGCGCGTGCAAGAACCAAAAGTTATTTTGGAAAGTTAATTTCATTTTTTGATGGTCTTATAGAAGAAAGATTGCGCCTAAGAGCTTTAGGAAATGAATCCAAGGCATGCAACGATGTGTTAGATTCTGCGCTGGAACTAATGCTGGAGGACAATTCACAACTGAGCCGCCTTAATGTATTGCATTTATTCCTGGATTTATTCGTGGCTGGGATAGACACAACATCAAGCTCAATAGAATGGGCGATGGCTGAGTTGCTACGTAACCCAAAAAAACTTGAAAAAGTTAAAGAAGAACTTCAAAATGTCATTGCCAAAGGTGAACCACTTGAAGAATCTCATATCTCGAAGCTTCCTTTCCTACAAGCAGTGGTGAAGGAAACTTTGCGCTTGCATCCACCTGGCCCACTGTTAGTGCCACACAAGACAGATATTGATGTCGAACTTTGTGGTTTCATGGTGCCTAAAAATGCACAAATTCTAGTTAATGTGTGGGCTATGGGGAGAGATGCAAGTATTTGGGAAAATCCGCATCAATTTATGCCTGAAAGATTCCTAGACAGTGAGATTGATTTTAAAGGCCAAGATTTTGAGTTGATTCCCTTTGGAGCTGGAAGAAGGATCTGTCCTGGATTGCCATTGGCTTATAGGACTATACACATTGTGTTGGCCTCTCTTCTATGTGACTATGATTGGAAGCTCGCGAATGGGCAAATGTCAGAAAACATCGATATGTCTGAGAAATTTGGAATTACCTTGCATAAGGCACAACCTCTCCATGTCGTTCCTGTCCAAGCATAA 1509 0.4195 MTMDSLVLLFLISFVCISIHILISNLGIKTPKSSKYPPGPHPFPIIGNILQLSSLPHQALAKLSQIHGPVMRLKLGSTTTIVISSPQVAKEVLHKNDHIFSNRKVPDSARALDHHKLSVGWTPTSDQWRILRRFCATQLFSTKKLDSTQVLRQRKVQELLDYVKESCKKGQALDIGEASFTTMLNSISNTLFSMDLAHYTSDKSQEFKDIIWGIMEEVGKPNVVDFFPIFRLLDPQGARARTKSYFGKLISFFDGLIEERLRLRALGNESKACNDVLDSALELMLEDNSQLSRLNVLHLFLDLFVAGIDTTSSSIEWAMAELLRNPKKLEKVKEELQNVIAKGEPLEESHISKLPFLQAVVKETLRLHPPGPLLVPHKTDIDVELCGFMVPKNAQILVNVWAMGRDASIWENPHQFMPERFLDSEIDFKGQDFELIPFGAGRRICPGLPLAYRTIHIVLASLLCDYDWKLANGQMSENIDMSEKFGITLHKAQPLHVVPVQA* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01333 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Rops4g01333 502 FunFam Cytochrome P450 76C4 28 498 - -
Rops4g01333 502 SUPERFAMILY Cytochrome P450 37 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 Gene3D Cytochrome P450 23 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 Pfam Cytochrome P450 37 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01333 502 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 14 501 - -
Rops4g01333 502 CDD CYP76-like 64 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01333 Rops-Chr4 34818863 34821409 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01333 9 501 Cytochrome P450 AT2G45550 50.100 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01333 - - gmx:100779789 780.4