Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01330 ATGGACTACCTTGCACTTCTTCTCCTAACTTCCTTTGTGTGGATAAGCATTCATGTCCTCATATCCTGCCTCGGGATCAAAACACCTGGATCTTCCAAATACCCACCAGGGCCTCGCTCTTTTCCTATCATAGGAAACATCTTGGAACTTGGTAGCCAGCCTCACAAGGCACTTACCAAGCTTTCTCAAACTTATGGACCTGTAATGAGTCTGAAACTTGGTAACACAACCACCATAGTCATTTCCTCACCACAAGTTGCAAAAGAAGTATTGCATAAAAATGACCAAATCTTCTCAAATAGGACAGTCCCAGATACTGTCCGAGCACTTGACCACCACATACTTTCAGTGGTATGGATGCCACCTTTAGCACAATGGAGGATCCTTAGGAAAGTTTGTGCTACTAAAGTGTTCTCTTCTCAACAGCTTGATTCTACACAAATTCTTCGTCAAAGGAAGGTGCAAGAATTGATGGATTACGTCAAGGAAAGCTGCAAGAAAGGACAAGCTTTGGATATTGGTGAGGCTTCCTTTATAACCGTGCTTAATTCAATATCAAACACTTTCTTCTCTATGGATTTGGTTCATTACACTTCTGATAAGTCTCAAGAGTTCAAGGACATCATTTGGGGCATCATGGAAGAAGCTGGAAGGCCTAATGTTGTGGACTTTTTCCCAATCTTTCGCCTGCTTGATCCACAATGTGTGCGTGCAAGAATGAATAAATATTTTGAAAAGCTCATTTCATTTTTTGATGGTCTTATAGAAGAAAGATTGCGCCTAAGAGCTTTACAAAATGAATCCAAGGCTTGCAATGATGTCTTAGATTCTGTGCTTGAACTTATGCTGGAGGACAATTCGCAACTAAGCCGCAGTCATGTATTGCATTTATTTCTGGATTTGTTCGTGGCTGGAATAGACACAACATCAAGTTCAATAGAATGGGCAATGACTGAGTTGCTACGTAACCCAGAAAAACTAGATCAGCTTAGAGAAGAGCTTCAACGGGTTCTTCCCAAAGGTGAACGACTTGAAGAATCACATATCTCAAAGCTTCCTTATCTACGAGCAGTGGTAAAGGAAACTTTCCGTTTGCATCCACCCATTCCATTATTAGTGCCACACAAATCAGATGTTGATGCTGAATTATGTGGCTTCATGATACCTAAAAATGCACAAATTCTTGTTAATGTATGGGCTATGGGAAGAGATTCAAGTATTTGGAAAAACCCAAATCAATTTATGCCTGAAAGATTCTTAGAGAGTGAAATTGATTTTAAAGGTCAATATTTTGAGCTAATTCCCTTTGGAGCTGGAAGAAGAATCTGCCCTGGATTGCCATTGGCTTCTAGGACTGTGCACATTGTATTGGCCTCTCTTCTATATGGCTATGATTGGAAGCTTGCGAATGGACAAAGGTCAAAAGAATTGGACATGTCTGAGAAATATGGGATTACCTTGCATAAGGCACAACCTCTTCAAGTCATTCCCATTGCAGCATAA 1503 0.4052 MDYLALLLLTSFVWISIHVLISCLGIKTPGSSKYPPGPRSFPIIGNILELGSQPHKALTKLSQTYGPVMSLKLGNTTTIVISSPQVAKEVLHKNDQIFSNRTVPDTVRALDHHILSVVWMPPLAQWRILRKVCATKVFSSQQLDSTQILRQRKVQELMDYVKESCKKGQALDIGEASFITVLNSISNTFFSMDLVHYTSDKSQEFKDIIWGIMEEAGRPNVVDFFPIFRLLDPQCVRARMNKYFEKLISFFDGLIEERLRLRALQNESKACNDVLDSVLELMLEDNSQLSRSHVLHLFLDLFVAGIDTTSSSIEWAMTELLRNPEKLDQLREELQRVLPKGERLEESHISKLPYLRAVVKETFRLHPPIPLLVPHKSDVDAELCGFMIPKNAQILVNVWAMGRDSSIWKNPNQFMPERFLESEIDFKGQYFELIPFGAGRRICPGLPLASRTVHIVLASLLYGYDWKLANGQRSKELDMSEKYGITLHKAQPLQVIPIAA* 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01330 500 Gene3D Cytochrome P450 25 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Rops4g01330 500 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 Pfam Cytochrome P450 35 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 SUPERFAMILY Cytochrome P450 32 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01330 500 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 498 - -
Rops4g01330 500 CDD CYP76-like 62 497 - -
Rops4g01330 500 FunFam Cytochrome P450 76C4 27 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01330 Rops-Chr4 34775849 34779673 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01330 5 498 Cytochrome P450 AT2G45550 50.000 5.07e-179 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01330 - - gmx:100809483 837.41