Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01319 ATGCTATCCTTGGATTTTCTTCCAAATCCTTATCTCTTTGCAGTTTTGACTGCAGCTTTTACCCTTTTGGTGGCTCAATTTGTGTTCAGAAAATTGAACAAAAGCCACAGGAAAAAGTACCATCCTGTTGGTGGCACTGTATTTAATCAGATGCTGAACTTTGACAGGGTGCACCATTATATGACTGATCTTGCAGGGAAATACAAGACATACAGGTTGCTCAATCCTTTCAGAAATGAGATTTACACAGCAGAACCAAGTAATGTTGAGTATATTCTCAAAACCAATTTTGAGAATTATGGAAAGGGGTTGTACAACCATGACAATTTGAGGGATTTACTAGGTGATGGGATTTTCACTGTTGATGGGGAGAAATGGCGTGAACAAAGGAAGATATCAAGTCATGAATTTTCCACCAGGATGTTAAGGGACTTCAGCACTTCAATATTCAGAAAGAATGCAGCAAAACTTGCAAACATTTTGTCTGAAGCTGCAAATTCTAATAATACATTGGAAATCCAAGCCCTTTTAATGAAATCAACTCTGGATTCAATTTTCCAAGTTGCATTTGGAACTGAACTTGATAATATGTGTGGATCAAGTGAAGAAGGGAAGAACTTTGCTGATGCTTTTGATACTGCAAGTGCATTAACCCTTTATCGTTATGTTGATGTCTTCTGGAAGATAAAGAAATTTCTGAATATTGGATCAGAGGCCACATTAAGAAAGAAAACTGAAATTTTAAATGAATTTGTCTTTAAGCTAATCAACACTAGAATTCAGCAAATGCACATTTCAATGGATGATTCTGTTAGCAAACGAGGAGATATTCTCTCAAGGTTTCTGCTAGTGAAGGAATATGATTCAACATACTTAAGAGATATAATTCTAAACTTTGTTATTGCTGGGAAAGACACAACGGCTGCTACACTTGCTTGGTTCATGTACATGCTATGCAAGTATCCTGCAGTACAAGAAAAAGCTTCAGAAGAAGTGAAAGAAGCAACCAACACAAAAACAATTAGTAGCTATAGTGAGTTTTTGTCTAGTGTGACAGAAGAAGCTCTTGAAAAGATGAATTATCTCCATGCAGCCATTAATGAAACTCTCAGACTTTATCCTGCAGTTCCTGTGGATGCAAAGATCTGTTTTTCTGATGATACATTACCGGATGGATATAGTGTAAATAAAGGAGATATGGTATCTTACCAACCTTATGCAATGGGGCGGATGAAATTCATATGGGGTGATGATGCAGAGGAATTTAGACCAGAAAGATGGCTTGATGAAAATGGCATTTTTCAGCCTGAGAGCCCTTTCAAGTTTACAGCTTTTCAGGCAGGTCCTCGGATTTGTTTAGGAAAGGAGTTTGCTTATAGACAGATGAAGATATTCTCTGCAGTTCTGTTAGGCTGTTTCCGCTTCAAATTGAATGATGAGAAGAAAAATGTCACTTACAAGACGATGATAAATCTTCATATTGATGGAGGTCTAGAAGTCAAAGTCTTACACAGACACTGGGATTAA 1527 0.3713 MLSLDFLPNPYLFAVLTAAFTLLVAQFVFRKLNKSHRKKYHPVGGTVFNQMLNFDRVHHYMTDLAGKYKTYRLLNPFRNEIYTAEPSNVEYILKTNFENYGKGLYNHDNLRDLLGDGIFTVDGEKWREQRKISSHEFSTRMLRDFSTSIFRKNAAKLANILSEAANSNNTLEIQALLMKSTLDSIFQVAFGTELDNMCGSSEEGKNFADAFDTASALTLYRYVDVFWKIKKFLNIGSEATLRKKTEILNEFVFKLINTRIQQMHISMDDSVSKRGDILSRFLLVKEYDSTYLRDIILNFVIAGKDTTAATLAWFMYMLCKYPAVQEKASEEVKEATNTKTISSYSEFLSSVTEEALEKMNYLHAAINETLRLYPAVPVDAKICFSDDTLPDGYSVNKGDMVSYQPYAMGRMKFIWGDDAEEFRPERWLDENGIFQPESPFKFTAFQAGPRICLGKEFAYRQMKIFSAVLLGCFRFKLNDEKKNVTYKTMINLHIDGGLEVKVLHRHWD* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01319 508 Pfam Cytochrome P450 48 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01319 508 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01319 508 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01319 508 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01319 508 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01319 508 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01319 508 SUPERFAMILY Cytochrome P450 39 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01319 508 CDD CYP86A 69 498 - -
Rops4g01319 508 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01319 508 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01319 508 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01319 508 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01319 508 PANTHER CYTOCHROME P450 28 499 - -
Rops4g01319 508 Gene3D Cytochrome P450 26 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01319 Rops-Chr4 34618514 34622660 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01319 12 505 Cytochrome P450 AT2G45510 53.200 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01319 - - gmx:100789049 877.085