Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01318 ATGCTTTGCATCTGGTATACAAAATTCATGCGCGTGTTCTGCCTTGCCAGAGGGGACCCAGAATATGCACCTGTGAAAGGCACAGTGTTTAACCAGTTATTCCACTTCAACAATCTCCATGACTACCATACTCAAGTGGCAAAAACTCATCCAACTTTCCGGCTTCTTGCTCCTGATCAAAGCGAGTTGTACACCATAGATTCAAGAAATGTTGAACACATATTGAAAACAAACTTTGACAAGTACTCCAAAGGCAAGTATAACAAGGATATTTTGACTGATCTTTTTGGTGAGGGGATTTTTAATGTTGATGGTGACAAGTGGAGGCAGCAGAGGAAGCTTGCAAGTTATGAATTCTCCACAAGAGTTCTTAGAGATTTCAGCTGTTCTGTTTTTAGAAGGAATGCTGCCAAGTTGGTTAGAGTTATGTCAGAATTTTCCCATGAGAGTCTGGCTTTTGATATGCAGGACTTACTAATGAGATGCACTTTGGACTCCATATTCAAAGTTGCGTTTGGAACAGAATTGAACTGCTTAGAGGGATCAAGCAAAGAGGGAACTGAATTCATGAAGGCCTTTGATGAATCAAATGCTTTGATTTATTGGCGTTATGTTGATCCCTTCTGGAGGCTCAAGAGGTTTCTTAACATTGGTTGTGAAGCTACCCTTAAGGGAAATGTGAAATTGATAGATAACTTTGTCCATGGATTAATTAAGAACAAAAGAGCACAACTTTCAGTTCAGCAAGATTCTAATGCTAAAGAGGACATACTCTCAAGGTTTTTGATGGAGAGCAAGAAGGACCCAACAACTATGACTGATCAATGTTTGAGGGATATAATTCTGAATTTTATGATAGCTGGCAAAGACACAAGTGCAAACACTCTTTCATGGTTCTTTTACATGCTTTGCAAGAGCCCTCTTGTGGAGGAAAAGATTGCACAAGAAGTGAGAGATGTCACTTGTAACCATGAAAGTGAACCTAACGACATAGATGAGTTTGTTGTCAATTTAACAGATGCAAACCTTGATAAAATGCATTATCTTCATGCAGCGTTGACAGAGACCTTGAGATTGTACCCAGCAGTCCCTGCGGATGGAAGGATTGCAGAGGCACCTGATGTTCTTCCTAATGGCCACAAACTCAAAAAGGGGGATGGAGTGTACTACTTGGCCTATAGTATGGGTAGAATGACTTCCATTTGGGGGGAAGATGCTGAGGAATTTCGTCCTGAAAGATGGCTCAAAAATGGAACTTTCCAACCCGAATCTCCATTCAAATTCGTAGCTTTCCATGCTGGACCTCGTATGTGTTTAGGAAAAGACTTTGCTTATAGACAGATGAAAATAGTAGCAATGGCTCTTCTTCGTTTCTTCAAGTTCAAACTCTCAAATGGAGAACAAAATGTGACTTATAGGGTCATGTTTACTCTTCACATGGACAAGGGCCTACCTCTCCTTGCAATTCCAAGGACATGA 1479 0.4057 MLCIWYTKFMRVFCLARGDPEYAPVKGTVFNQLFHFNNLHDYHTQVAKTHPTFRLLAPDQSELYTIDSRNVEHILKTNFDKYSKGKYNKDILTDLFGEGIFNVDGDKWRQQRKLASYEFSTRVLRDFSCSVFRRNAAKLVRVMSEFSHESLAFDMQDLLMRCTLDSIFKVAFGTELNCLEGSSKEGTEFMKAFDESNALIYWRYVDPFWRLKRFLNIGCEATLKGNVKLIDNFVHGLIKNKRAQLSVQQDSNAKEDILSRFLMESKKDPTTMTDQCLRDIILNFMIAGKDTSANTLSWFFYMLCKSPLVEEKIAQEVRDVTCNHESEPNDIDEFVVNLTDANLDKMHYLHAALTETLRLYPAVPADGRIAEAPDVLPNGHKLKKGDGVYYLAYSMGRMTSIWGEDAEEFRPERWLKNGTFQPESPFKFVAFHAGPRMCLGKDFAYRQMKIVAMALLRFFKFKLSNGEQNVTYRVMFTLHMDKGLPLLAIPRT* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01318 492 CDD CYP86A 51 484 - -
Rops4g01318 492 PANTHER CYTOCHROME P450 12 484 - -
Rops4g01318 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Rops4g01318 492 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01318 492 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01318 492 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01318 492 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01318 492 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01318 492 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01318 492 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01318 492 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01318 492 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01318 492 Pfam Cytochrome P450 28 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01318 492 Gene3D Cytochrome P450 19 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01318 492 SUPERFAMILY Cytochrome P450 24 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01318 Rops-Chr4 34601730 34608750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01318 1 492 Cytochrome P450 AT2G45510 63.489 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01318 - - gmx:100792128 840.876