Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01315 ATGAAAATGCAGAAAGCTTGGTTCTATGAGGAGTATGGTCCTAAGGAAGTCCTTAAGTTAGGGAATTTACCAATTCCTACTCCTCAGAACAATCAACTACTTGTCCAAGTTCATGCTGCTGCTTTGAATCCGATTGATTTCAAGAGGCGCTTACATCCCATCTTTCCTTCTGAGTTCCCTGTGGTTCCTGGCTGTGACATGGCTGGTGTTGTGATAGGAAAAGGTGTTGATGTTACAAAATTTGACATAGGTGATGAGGTCTATGGTAACATCCATGATTTCAATACTGGGGAAAAACTAAAGCAACTTGGAACTTTGGCACAGTTCATTGTTGTGGAAGAGAACTTGGTTGTCAGAAAACCAAAATGCCTTTCATTTGAGGAGGCTGCAAGCTTGCCTTTGGCAGTGCAGACAGCAATAGAAGGCTTCAAATCTGCAGGTTTTAAGAAGGGCCAGACAATTTTTGTGGTTGGTGGAGCAGGTGGGGTTGGGACTTTAGTCATTCAGCTGGCTAAACTGTTGTATGGAGCTTCTTATGTAGTGGCTACTACTAGCTCCCCAAAAGTGGATTTTGTAAAGCAGTTAGGTGCTGATAAAGTGGTGGACTATACAAAGATTAAATATGAAGACATTGAGGAGAAATTTGATTTTCTTTATGACACAGTTGGTGACTGCAAGAAATCTGTTGTTGTAGCAAAAAATGATGCAGCAATAGTTGACATAACATGGCCTCCATCACATCCAAGAGCAGTTTATTCAAGTTTGACAGCATCTGGGGAAAGCTTGGAGAAGCTAAGGTCATATTTGGAAAGCAAAGAGCTCAAACTTCTGATTGATCCCACAGGTCCATATCATTTTGACAATGTGATTGAGGCATTTCGATATCTAGAAACTGGAAGAGCTTGGGGAAAAGTTGTTATCTCATGCTTCCCTTTGGAGGATACTCAGTCTCCCATTTTATCTGGGGTCAATACGAATATAGAAGTGAATGGAATCTGA 999 0.4114 MKMQKAWFYEEYGPKEVLKLGNLPIPTPQNNQLLVQVHAAALNPIDFKRRLHPIFPSEFPVVPGCDMAGVVIGKGVDVTKFDIGDEVYGNIHDFNTGEKLKQLGTLAQFIVVEENLVVRKPKCLSFEEAASLPLAVQTAIEGFKSAGFKKGQTIFVVGGAGGVGTLVIQLAKLLYGASYVVATTSSPKVDFVKQLGADKVVDYTKIKYEDIEEKFDFLYDTVGDCKKSVVVAKNDAAIVDITWPPSHPRAVYSSLTASGESLEKLRSYLESKELKLLIDPTGPYHFDNVIEAFRYLETGRAWGKVVISCFPLEDTQSPILSGVNTNIEVNGI* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01315 332 Pfam Zinc-binding dehydrogenase 195 307 - -
Rops4g01315 332 CDD MDR_like_2 5 307 - -
Rops4g01315 332 Gene3D - 11 307 - -
Rops4g01315 332 SUPERFAMILY GroES-like 3 156 IPR011032 -
Rops4g01315 332 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 3 309 IPR044626 GO:0016628
Rops4g01315 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 124 276 IPR036291 -
Rops4g01315 332 SMART PKS_ER_names_mod 13 307 IPR020843 GO:0016491
Rops4g01315 332 Gene3D - 143 258 - -
Rops4g01315 332 Pfam Alcohol dehydrogenase GroES-like domain 31 90 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01315 Rops-Chr4 34588549 34591503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01315 4 222 Monolignol Biosynthesis Gene Families AT3G19450 24.390 1.28e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01315 K18980 - zju:107423748 499.59