Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01295 ATGGCTTCTCGAAACGGCGTCGCTCAAGCTCATAGGGGAAGCGCCAAGTTCGATCGCCCCAACCACCTCAGAACGACGTCGCTCAAGCACCGCCTGCCTCCCTCACCGGGATCCACCGTCCGCCGCAGCAGCTCCGCTTCTCTCGCCGCCAGAACCGGAGACGGAGTGCCTGGAAGAGTTCGAGTGGCTGTAAGATTGAGACCTCGAAATAATGAAGAAATGATGGCCGATGCTGATTTTGCTGACTGTGTTGAATTACAACCAGAGCTTAAAAGACTGAAACTTCAGAGAAACAATTGGGATTCAGACACTTATGAGTTTGATGAAGTGCTTACTGAATTTGCATCACAGAAGCGTGTTTATGAAGTTGTAGCTAAGCCAGTTGTTGAGAGTGTTCTTGATGGTTATAATGGAACTGTGATGGCATATGGTCAAACTGGAACGGGGAAAACTTTTACTCTTGGACAATTGGGAGAAGAAGACACCTCTGATCGTGGCATCATGGTTCGTTCCATGGAGGATATTTTAGCTGACCTATCTCCAGTAACAGATTCTGTCACTGTCTCATATTTGCAGCTTTACATGGAGACTCTCCAGGACTTGCTTAATCCAGCAAATGATAATATTCCCATAGTGGAGGACCCAAGAACTGGTGATGTGTCCTTGCCTGGGGCAACTCTTGTTGAAATCAGGGATCTGCAAAGTTTCTTGGGGTTGCTAAGAGTAGGGGAGGCTCATCGAGTTGCTGCTAACACAAAGTTGAATACTGAATCTTCTCGTAGTCATGCTATACTGACGTTACAAGTTAAGAGGTCTGTAGTTGACAGTGAAGATCCTGTTTCTACTGAAAATGATAATGCCTCACACTTGACTATGCCTTCAAAACCACTTCTTCGAAGGAGCAAGCTGGTTGTGGTCGATTTGGCAGGATCAGAGCGTATCCATAAGTCAGGAAGTGAAGGGCACATGCTAGAGGAAGCTAAATCTATCAATCTTTCTCTTAGTGCACTGGGAAAATGTATTAATGCCCTGGCAGAAAACAATGCTCATGTTCCATTTCGTGATTCAAAGCTTACTAGGTTGCTCAGAGATTCCTTTGGAGGAACAGCGAGGACATCATTGATTGTGACCATTGGCCCATCTCCACGTCATCGAGGAGAGACTTCTAGTACCATATTGTTTGGCCAAAGGGCTATGAAAGTTGAGAATATGCTGAAAATAAAGGAGGAGTTTGATTATAAAAGTTTGTCCCGGAGGCTTGAGGTACAATTGGATAAGCTCATTGCAGAAAATGAAAGGCAGCAGAAAGCTTTTGAGGATGAAGTTGAAAGAATAAATTTGGAGGCACAATGTCGTATTGCTGAGGTTGAGAGGAGATTTGCAGATGCATTAGAGAAAGAGAGATTGAAATGCCAAATGGAGTACATGGAATCAGTTAAGCAGCTGGAGCAGAAGTTGGTGTCAAGTCAAGAAAAACATGCATGCAATTGTTTTGTGGATGCTTGTGGAGAGGGGCTTACACCAGCTTCTGCCAATGAAGTTGCTGAGGTAAAAAAGCTGCTTGAAAATGAAAGCAATAGGAGAAAGGCAGCTGAAACAGAGATAGAACATCTAAAATGTCAGTTGGGGAAATATACAAAAGCAGAGGCGGGAGGGGATGCAGGAATTACAAATCTTCACAGCATCCTGGAGGATGAGGCTAATCAGAAAAAGAAACTTGAAGAAGAAATAATAATATTAAGAAGTCAATTATTGCAGTTGAACTTTGAAGCTGACCAGATGAGAAAGTGTATAGAAAGTGAAAGCTCTATAAATGCATTTCCTGGCATGGATTCTTCCATGTCCCAAGCTAAACATTCCCAACTCAGAGACTCTAGGAATGGTCAGAAGGCATCTGTTGCTGCCCTCTTTGAGCAAGTTGGATTGCAAAAGATTTTGTCATTGCTGGAGTCAGATGATGCCAATGTACGAATTCATGCTGTAAAAGTGGTTGCCAACCTAGCAGCTGAAGAGGCAAATCAAAAGAGTATTGTTGAATCTGGTGGCCTTACTTCCTTGCTGATGCTTCTTAGAAGATATGAGGATGAAACTGTTCGCAGAGTAGCAGCAGGGGCAATTGCCAATCTTGCCATGAATGAAGCCAATCAAGAACTTATAATGGCTGAAGGAGGAATTACTCTGTTATCAATGGCTGCATCTGATGCTGAAGAACCACAAACTCTTCGAATGGTTGCTGGGGCCATTGCTAACCTATGTGGAAATGATAAAATATTGATGAAGCTGAGATCTCAGGGAGGCGTCAAAGCTTTACTGGGAATTGTAAGATGTGGACATCCTGAAGTTATTTCACAAGTTGCACGAGGAATTGCCAACTTTGCTAAATGCGAGTCTCGTGTTTCAAATCAAGGGATACGAAGTGGCAAATCTTTTTTGATAGAAGATGGTGCACTTCCGTGGATAGTACAAAATGCTAATAATGAATCTGCACCAATCAGGCGTCACATTGAACTTGCACTCTGCCACTTGGCACAGCATGAAGAGAATGCAAAGGACATGATCAGTGGAGGTGCCCTTTGGGAGCTTGTCAGGATTTCACGTGATTGTACACGAGAGGACATAAGGAATCTTGCTCGTCGGACTCTAAGTTGTATCGCGCCATTCAAATATGAATTGCAGCGATTACGTATAGACTATTGA 2697 0.4357 MASRNGVAQAHRGSAKFDRPNHLRTTSLKHRLPPSPGSTVRRSSSASLAARTGDGVPGRVRVAVRLRPRNNEEMMADADFADCVELQPELKRLKLQRNNWDSDTYEFDEVLTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGQLGEEDTSDRGIMVRSMEDILADLSPVTDSVTVSYLQLYMETLQDLLNPANDNIPIVEDPRTGDVSLPGATLVEIRDLQSFLGLLRVGEAHRVAANTKLNTESSRSHAILTLQVKRSVVDSEDPVSTENDNASHLTMPSKPLLRRSKLVVVDLAGSERIHKSGSEGHMLEEAKSINLSLSALGKCINALAENNAHVPFRDSKLTRLLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRRLEVQLDKLIAENERQQKAFEDEVERINLEAQCRIAEVERRFADALEKERLKCQMEYMESVKQLEQKLVSSQEKHACNCFVDACGEGLTPASANEVAEVKKLLENESNRRKAAETEIEHLKCQLGKYTKAEAGGDAGITNLHSILEDEANQKKKLEEEIIILRSQLLQLNFEADQMRKCIESESSINAFPGMDSSMSQAKHSQLRDSRNGQKASVAALFEQVGLQKILSLLESDDANVRIHAVKVVANLAAEEANQKSIVESGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMAASDAEEPQTLRMVAGAIANLCGNDKILMKLRSQGGVKALLGIVRCGHPEVISQVARGIANFAKCESRVSNQGIRSGKSFLIEDGALPWIVQNANNESAPIRRHIELALCHLAQHEENAKDMISGGALWELVRISRDCTREDIRNLARRTLSCIAPFKYELQRLRIDY* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01295 898 Coils Coil 514 548 - -
Rops4g01295 898 ProSiteProfiles Kinesin motor domain profile. 59 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops4g01295 898 PANTHER CENTROMERE PROTEIN E 59 624 IPR027640 GO:0003777|GO:0007018
Rops4g01295 898 MobiDBLite consensus disorder prediction 1 54 - -
Rops4g01295 898 Pfam Kinesin motor domain 65 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops4g01295 898 Coils Coil 417 466 - -
Rops4g01295 898 Gene3D - 614 894 IPR011989 -
Rops4g01295 898 Gene3D Kinesin motor domain 54 432 IPR036961 -
Rops4g01295 898 Coils Coil 556 590 - -
Rops4g01295 898 FunFam Kinesin-like protein 610 885 - -
Rops4g01295 898 Pfam Armadillo/beta-catenin-like repeat 673 710 IPR000225 GO:0005515
Rops4g01295 898 MobiDBLite consensus disorder prediction 31 50 - -
Rops4g01295 898 FunFam Kinesin-like protein 51 431 - -
Rops4g01295 898 SMART kinesin_4 57 409 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops4g01295 898 ProSitePatterns Kinesin motor domain signature. 301 312 IPR019821 GO:0003777|GO:0005524|GO:0007018
Rops4g01295 898 Coils Coil 472 492 - -
Rops4g01295 898 CDD KISc 59 399 - -
Rops4g01295 898 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 640 682 IPR000225 GO:0005515
Rops4g01295 898 SMART arm_5 670 711 IPR000225 GO:0005515
Rops4g01295 898 SMART arm_5 845 886 IPR000225 GO:0005515
Rops4g01295 898 SMART arm_5 629 669 IPR000225 GO:0005515
Rops4g01295 898 SMART arm_5 754 794 IPR000225 GO:0005515
Rops4g01295 898 SMART arm_5 712 753 IPR000225 GO:0005515
Rops4g01295 898 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 681 724 IPR000225 GO:0005515
Rops4g01295 898 PRINTS Kinesin heavy chain signature 351 372 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops4g01295 898 PRINTS Kinesin heavy chain signature 302 320 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops4g01295 898 PRINTS Kinesin heavy chain signature 135 156 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops4g01295 898 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 437 IPR027417 -
Rops4g01295 898 SUPERFAMILY ARM repeat 631 892 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01295 Rops-Chr4 34345580 34357585 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01295 52 448 Calmodulin-binding Proteins AT5G65930 33.575 3.37e-47 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01295 - K10396 gmx:100793472 1479.54