Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01283 ATGCAGCATGCACCACAGGCATCCAAAGGCACTCACGTGAACTCCCATGCACAAGCTTGTTGCTTCCCACGAACCCATGCAGCTCGTGTTGCACCCGTGACCAACAAAGGGCTTACCACGGGTAAAGAAGAGGTTCACCACAACGTTGCTATTGAGAGGTCGAGAATCGTCAACCATCGAGATGGCTTCTCCTTCCTCCCCCCTCCAAACCTTCTCGTCCTCGCTTTGTCTTCCTCTGCACCGGTACCGAAAGTGCTCATGCAGGCCTGTTTGATGAGAATGGAAAGCTTCTTGGAGTTTGCTCTCAAAGCAGAAGTTGCACCTACAGAAGTAAAAGGGTCTGGGTCCGTGCAACTACTTGTTCTCTTGTTGCGGTGGATCCCGATAGCTCACCTGTTTCGGTTTCTTGGAGTGGTGATTGCATGGATGGATCATAGGGCTGTGGAGCAGGCCGAAAATATCAATCCATGTAACTCATCTGTATTGGAGTATTGTGGGGAGCCGCATCACCTGGAAATAGAGCCACCAAAGCTTCTACGGGTTAAAGAAAATTTGCAAGAATCTTGGTCAATGGTTTTCAGGAAGGTTGCTGCCACAACAAGCAGAGGAGTTGATGGCTACATACCTAGTTACCCGAGTCTGCCACCCTCGTTGATTCGCCAACATGCCACGGTGCATGCAACTTACGCATGCATGAATGTAGGAGATGGCTACCGCCTCCCCCACTGTTGCAACTCAACCTCTTTTGTAGTATATTATAAGAAAAGGACGACCCCATTCATCATGAGTACGAACAGGTACTTTGAGGCTACCAACGAGAAGCTTGGTATTGACATGAGGTTCAAGGTGAGGTTTGAAGGGGAGGATGCTACTGAGACTGACAAAAGAGTTTCGGGTACCATTGTTGAAGTGAAGATATTTCTCCTCAGTAGGTAA 936 0.4872 MQHAPQASKGTHVNSHAQACCFPRTHAARVAPVTNKGLTTGKEEVHHNVAIERSRIVNHRDGFSFLPPPNLLVLALSSSAPVPKVLMQACLMRMESFLEFALKAEVAPTEVKGSGSVQLLVLLLRWIPIAHLFRFLGVVIAWMDHRAVEQAENINPCNSSVLEYCGEPHHLEIEPPKLLRVKENLQESWSMVFRKVAATTSRGVDGYIPSYPSLPPSLIRQHATVHATYACMNVGDGYRLPHCCNSTSFVVYYKKRTTPFIMSTNRYFEATNEKLGIDMRFKVRFEGEDATETDKRVSGTIVEVKIFLLSR* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01283 311 PANTHER RIBULOKINASE 139 194 - -
Rops4g01283 311 Gene3D - 104 191 - -
Rops4g01283 311 Pfam Auxin response factor 245 305 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01283 Rops-Chr4 34112729 34113653 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01283 247 305 B3 DNA Binding Superfamily AT4G23980 55.932 1.65e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01283 K00875 - qsu:112013948 92.0485