Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01274 ATGGAATCAGACATGAACCCAGATGCCCAGAGAAGTGGAAGTGGTGTCAGTGTCAGCAATGCATCATCTAATCTTGTGTTGTATTCTTACTGGCAAAGCTCCTGTTCTTGGCGTATCCGCTTTGCTTTAACCCTCAAAGGGATCGCATATGAGTACAAAGCAGTGGACCTTATAAAAGGAGAGCAGCACAGTCCAGAGTTTGAGAGATTGAATCCTCTGCATTATGTTCCAGTATTAGTTGATGATGAAGTGGTGGTTTCAGATTCTTATGCAATATTTCTGTATTTGGAGGAAAAATATACTCAGAAGCCACTGTTACCAGCTGATCCTCAGCTTAGAGCTCTCAATCTTCAGGTAGCAAGTATTATCAACTCCAGCATACAACCTCTTCATATGCTAACTGTTCTGAAAGATATGGAGAAAATGTTTGGTGCAGACTCAAAACCGTGGGCCCAATTTACCATAGACAAAGGTTTCTTTGCTCTTGAGAGGTTGTTGAAGGATTTTGCTGGTACATATGCCACAGGGGAACATATCTATATGGCTGATGTATTTTTGGCCCCACAGATTGCACAGGCACTTCAGAGGTTTGATACAGATATGTCCAAATTCCCTACACTGAGTAGGTTGTATGAAACATACAAGGCTTTGCCAGAGTTCCAGGCCTCATCACCACAAAGACAACCTGATGCCTGCATTCATAACCCTTGA 711 0.4248 MESDMNPDAQRSGSGVSVSNASSNLVLYSYWQSSCSWRIRFALTLKGIAYEYKAVDLIKGEQHSPEFERLNPLHYVPVLVDDEVVVSDSYAIFLYLEEKYTQKPLLPADPQLRALNLQVASIINSSIQPLHMLTVLKDMEKMFGADSKPWAQFTIDKGFFALERLLKDFAGTYATGEHIYMADVFLAPQIAQALQRFDTDMSKFPTLSRLYETYKALPEFQASSPQRQPDACIHNP* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01274 236 Pfam Glutathione S-transferase, C-terminal domain 146 221 IPR004046 -
Rops4g01274 236 SFLD Main (cytGST) 25 215 - -
Rops4g01274 236 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 23 104 IPR004045 -
Rops4g01274 236 CDD GST_N_Zeta 25 97 IPR034333 -
Rops4g01274 236 SUPERFAMILY GST C-terminal domain-like 104 231 IPR036282 -
Rops4g01274 236 CDD GST_C_Zeta 110 228 IPR034330 -
Rops4g01274 236 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 109 233 IPR010987 -
Rops4g01274 236 Gene3D Glutaredoxin 27 102 - -
Rops4g01274 236 SFLD Glutathione Transferase (cytosolic) 25 215 IPR040079 -
Rops4g01274 236 Gene3D - 106 232 - -
Rops4g01274 236 FunFam Maleylacetoacetate isomerase 108 234 - -
Rops4g01274 236 NCBIfam maleylacetoacetate isomerase 27 231 IPR005955 GO:0003824|GO:0005737|GO:0009072
Rops4g01274 236 Pfam Glutathione S-transferase, N-terminal domain 27 104 IPR004045 -
Rops4g01274 236 PANTHER MALEYLACETOACETATE ISOMERASE 25 231 - -
Rops4g01274 236 SUPERFAMILY Thioredoxin-like 23 108 IPR036249 -
Rops4g01274 236 FunFam Glutathione S-transferase Z1 23 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01274 Rops-Chr4 33783831 33787398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01274 23 230 Glutathione S-transferase Gene Family AT2G02380 50.718 1.03e-74 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01274 K01800 - gmx:100796296 378.637