Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01269 ATGATTTCTCAATCTCTTTTGCTTGCTCTCATTCTGGTATTATTCTCCTGTTTTCTTCTCAAACTCCTCTTCTTTAAGAGAAACAATAAAACAAAGTCTCATTTGCGGCACCCTCCAAGTCCACCAACATTACCCATAATTGGCCATCTCCATTTGCTTAAACCCCCTATCCATCAAGCCTTTCGAGACCTCTCCCACCGATATGGGCCTCTTCTTTTCCTTCGAATTGGCTCTGTTCCATTCATCGTGGCCAGCAACCCAGCACTCGCCAAAGAGTTTCTTAAGACAAACGAGCTTACATATTCTTCCCGTATGAAGAACATGGCCATCGACATTATTACATACGATGATGCTTCCATTTTTGCTTTTTCCCCTCCTGACACCTGTTGGAAATTCATCAAAAAACTCAGCATCACTGAGCTCTTGGGAAACCGAACTATTGGACAGTTCTTACCTATTCGGACACGGGAACTCCACGAACTCATTAAAACTCTAGCCTACAAATCCAATGTCAGAGAGAGCGTGAACCTCTCTGAAGAGTTGTTGATTCTTTCCAACAATATAATATCGCAGATGATGTTGAGTATCAAGAGCTCCGGAACAGACGGCCAGGCGGAAGAGGTGAGGGCTTTGGTTCGGGAGGTGACACAGATCTTTGGGGAATTTAACGTATCGGATTTCATAGGATTTTGCAAGAACATAGACTTTCAAGGTTTCAAAAAGAGGGCCATGAACATACACAAGAGGTACGATGCTTTGTTGGAGAAGGTCATCTCTGATCGCGAGGAATCGAGAAGGAAACTGACGTTAGAGGGTAGTGAAGATGGAGAAGAGAAAGTGAAGGATTTTCTGGACATTTTGCTTGATGTCTCCGAGGAGAAAGATTGCGAGGTCAAGTTAACTAGGAACCATATCAAATCATTGATCTTGGATTGTTTTACAGCAGCTACCGACACTACTGCCATCTCAGAGGAATGGGCAATAGCAGAACTGTTCAACAATCCAAGGGTGCTGAAGAAAGCCCAAGAAGAGGTAGATAGAGTCACTGGGAACGAAAGGTTAGTGTGTGAAGCAGACGGTTCAAACCTTCCTTACATACAAGCCATCATAAAAGAAACAATGAGGCTTCACCCGCCAGTACCAATGATTATGAGGAAGGGAATCGAAGACTGCGTGGTTGATGGGTACATGATTCCAAAAGGCTCAATAGTATGCACTAACATTTGGGCCATGGGAAGGGACCCAAAGATCTGGGAAAACCCATTAGAGTTCAGGCCAGAGAGGTTTCTAGAAGGTGAAGGGAGTGCAATAGATATCAAAGGACATCACTTTGAGTTGTTGCCATTTGGTTCTGGAAGGAGAGGTTGTCCTGGCATGCCTTTCGCCCTGCGGGGATTGCCCTCCACTATTGGAGCATTGATACAGTGCTTTGAGTGGAAGATGCTCGATACCCAAGGTAAGATTTTAAGCCCTGGCGGAAAAATTGATATGGATGAACAGCCAGGAATGACTGCTCCAAGGGCCCATGAGCTTATTTGTATTCCAGTTGCTCGATTGAATCCCACTCCTTTTCTTCAAGTGTAG 1584 0.4451 MISQSLLLALILVLFSCFLLKLLFFKRNNKTKSHLRHPPSPPTLPIIGHLHLLKPPIHQAFRDLSHRYGPLLFLRIGSVPFIVASNPALAKEFLKTNELTYSSRMKNMAIDIITYDDASIFAFSPPDTCWKFIKKLSITELLGNRTIGQFLPIRTRELHELIKTLAYKSNVRESVNLSEELLILSNNIISQMMLSIKSSGTDGQAEEVRALVREVTQIFGEFNVSDFIGFCKNIDFQGFKKRAMNIHKRYDALLEKVISDREESRRKLTLEGSEDGEEKVKDFLDILLDVSEEKDCEVKLTRNHIKSLILDCFTAATDTTAISEEWAIAELFNNPRVLKKAQEEVDRVTGNERLVCEADGSNLPYIQAIIKETMRLHPPVPMIMRKGIEDCVVDGYMIPKGSIVCTNIWAMGRDPKIWENPLEFRPERFLEGEGSAIDIKGHHFELLPFGSGRRGCPGMPFALRGLPSTIGALIQCFEWKMLDTQGKILSPGGKIDMDEQPGMTAPRAHELICIPVARLNPTPFLQV* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01269 527 PANTHER STEROID 21-HYDROXYLASE-RELATED 15 508 - -
Rops4g01269 527 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Rops4g01269 527 Gene3D Cytochrome P450 23 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 Pfam Cytochrome P450 38 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 SUPERFAMILY Cytochrome P450 32 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01269 527 FunFam Cytochrome P450 family protein 29 513 - -
Rops4g01269 527 CDD CYP93 69 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01269 Rops-Chr4 33627253 33628972 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01269 12 518 Cytochrome P450 AT5G06900 42.436 1.08e-148 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01269 K23179 - gmx:100783503 788.875