Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01237 ATGGTCCACCATAGCTACGTTAGGATTGCAGCCGTGCCAACCATAGAGGACAAAGTTGAACCCCTGCTTAACCTAGACAAAAGAGCAAGTCAATACGAAGGCTATGTCTACCGAAGAAACATCTCACAAGTTGATAAACCTCCTATTTATGAAGGTTCACTTGAAGCATTTGGATGGGCATGTCACCTTGCTAGGCAGGCATATGATGAAGGAATCTCTGAATTGGATACTCTAAGTGAGGAGTCTTACAAAGACAACACACTAATTCTGCAGCTTTTGAGAGACAACCTCACCTTGTGA 300 0.4333 MVHHSYVRIAAVPTIEDKVEPLLNLDKRASQYEGYVYRRNISQVDKPPIYEGSLEAFGWACHLARQAYDEGISELDTLSEESYKDNTLILQLLRDNLTL* 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01237 99 PRINTS 14-3-3 protein zeta signature 47 73 IPR000308 -
Rops4g01237 99 PRINTS 14-3-3 protein zeta signature 74 99 IPR000308 -
Rops4g01237 99 PANTHER 14-3-3 PROTEIN 60 99 IPR000308 -
Rops4g01237 99 Gene3D - 51 99 IPR036815 -
Rops4g01237 99 Pfam 14-3-3 protein 59 99 IPR023410 -
Rops4g01237 99 SUPERFAMILY 14-3-3 protein 57 99 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01237 Rops-Chr4 33123472 33124617 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01237 60 99 14-3-3 family AT1G26480 85.000 1.79e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01237 K06630 - ttt:THITE_2171333 75.0997