Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01203 ATGCGATTCAAGCTCGGGAAGCGCGTGATTCGTGTCACGAAATGGATCTTCAGGCGGTTCCGGATCCGACCCGGATACCAACGTCTGGGTTCCTCTCAATCGAAGAACCCCATGTCGAAAATTCTCACGTGGGGTCGCAAATTGACAAGGAAAACGAGATCCCTATGTTCCTCCAAGAAAAATGGGTCGGGTTACATTTCTGTTGGATGCGACCCGTTTCAGGACAGGGTTCCGGCGGTTCCAAAGGGGCATTTGGCGGTGTACGTGGGGCAGCAAGACGGTGAGTTTCACCGTGTTCTGGTGCCGGTGGTTTATTTCAACCACCCTTTGTTCAGTGAGTTGCTAGGGGAAGCAGAGAAGGAATACGGGTTTAACCACCAGGGTGGGATCACGATTCCTTGCCGGGTCACCGAGTTTGAACGGGTCAAGACCCGAATTGCATCCGGGTCGGGTGGTCGTGGTAGATTGGCGTGGCGGCGAATTGTTGACCGTTGA 495 0.5394 MRFKLGKRVIRVTKWIFRRFRIRPGYQRLGSSQSKNPMSKILTWGRKLTRKTRSLCSSKKNGSGYISVGCDPFQDRVPAVPKGHLAVYVGQQDGEFHRVLVPVVYFNHPLFSELLGEAEKEYGFNHQGGITIPCRVTEFERVKTRIASGSGGRGRLAWRRIVDR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01203 164 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 57 141 IPR003676 GO:0009733
Rops4g01203 164 Pfam Auxin responsive protein 53 143 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01203 Rops-Chr4 32573380 32573874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01203 78 139 Calmodulin-binding Proteins AT3G43120 53.226 2.88e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01203 K14488 - gmx:100808164 226.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops4g01203 4 32573380 32573874 Rops4g01203 4 32573380 32573874 ECH