Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01198 ATGGTGTCATCACTTCTATTTGTTCTATGCCTAACTCTTCCTTTGCTATTGTTGTTCTTCTTCCAGAAACACCGAATCATTAACAACGCACCCTGTCCACCTGGTCCTAGAGGCCTTCCCATAATTGGAAATCTTCATCAGCTGGATAATTCTGTTCTTCCTCTGCAACTATGGCAACTCTCAAAGATACATGGACCCCTGTTTTCTCTTAAACTCGGTTTAAGGCCAGCCATTGTTGTATCTTCAGCTAAAATTGCCAAAGAGGTATTGAAAAACAATGACCTTGTGTTTTGTGATCGACCAAACTTACTTGGCCTACAGAAGTTATCCTATAATGGGTCAGATGTTGCAGTTTCTCGATACAATGATTATTGGAGAGAAATAAGAAAAGTTTGTGTTATGCATATCTTTAGCTCCAAGCGAGTCTCAAGCTTTTACTCTATAAGAAAGTTTGAGGTCAAGCAAATGATGAAAAAGATATCTGAGCATGCTGCTTCTTCGGTTGTTTCAAACTTGAGTGAGCTACTTATTTCAATCTCAATCACTATAGTATGTAGGATTACATTTGGGAGAAGGTATGATGAGGAAGGAACTAAAAGGAGTAAGTTTCATGGGATGCTCAATGAGTTTCAGGCTATGTTAATGGCCTTCTATGTTTCAGATTATATTCCATTCTTGGGGTGGATTGATAAACTTACAGGATTGCATGCCCGTCTAGAACGAATTTTTAAGGAGTTTGATAAGTTCTACCAAGAGGTCATTGATGAACATATGGATCCCAATAGACAGAGAACAGAGGAAGAGGATATAGTTGATGTCTTACTTCAATTGAAGAAACAGCCTTCGTTTTCAATTGATCGCACTTTTGATCACATCAAAGGGGTTCTCGTGGACATGCTTGTAGCTGCAACGGATACCACTTCAGCCACAGCAGTTTGGGCTATGACCGCTCTAATAAAAAACCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATCAGGAACTTGGGAGAGAGAAAAGATTTCTTAGAGGAAGATGATATTCAAAAGTTTACCTATTTGAAGGCAGTGATAAAAGAGACACTGAGATTGCACCTACCAGTCCCACTACTTATGCCAAGAGAATCGAATGAAAGGTGCACTATAAGTGGCTACCAAATTCCGGCCAAGACACTGGTATATGTGAATGCTTGGGCTATTCATAGAGACCCTGAGTTTTGGAAAGACCCAGAAGAGTTTTATCCTGAGAGATTCTTAGACAGTTCTATAAACTTTCAGGGACAAGATTTTGAACTAATTCCATTTGGAGCAGGCCGTAGAATTTGCCCAGGTATCCCAATGGCGATTGCATCATTGGAACTTATCCTTGCTAATCTTCTTAATTCCTATGATTGGGAATTTCCAGATGGGTTGGTAAAGGAAGACATCGATACTGAAATGTTGCCAGGAATTACTCAACATAAGAATCATCCTCTTTGCCTTTTGCCAAGAGCCGTATATAATTGCCAGATAGACCTGTAA 1518 0.3946 MVSSLLFVLCLTLPLLLLFFFQKHRIINNAPCPPGPRGLPIIGNLHQLDNSVLPLQLWQLSKIHGPLFSLKLGLRPAIVVSSAKIAKEVLKNNDLVFCDRPNLLGLQKLSYNGSDVAVSRYNDYWREIRKVCVMHIFSSKRVSSFYSIRKFEVKQMMKKISEHAASSVVSNLSELLISISITIVCRITFGRRYDEEGTKRSKFHGMLNEFQAMLMAFYVSDYIPFLGWIDKLTGLHARLERIFKEFDKFYQEVIDEHMDPNRQRTEEEDIVDVLLQLKKQPSFSIDRTFDHIKGVLVDMLVAATDTTSATAVWAMTALIKNPRVMKKVQEEIRNLGERKDFLEEDDIQKFTYLKAVIKETLRLHLPVPLLMPRESNERCTISGYQIPAKTLVYVNAWAIHRDPEFWKDPEEFYPERFLDSSINFQGQDFELIPFGAGRRICPGIPMAIASLELILANLLNSYDWEFPDGLVKEDIDTEMLPGITQHKNHPLCLLPRAVYNCQIDL* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01198 505 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 SUPERFAMILY Cytochrome P450 33 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 CDD CYP71-like 64 491 - -
Rops4g01198 505 Pfam Cytochrome P450 33 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 PANTHER CYTOCHROME P450 71B11-RELATED 13 496 - -
Rops4g01198 505 Gene3D Cytochrome P450 27 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01198 505 Coils Coil 325 345 - -
Rops4g01198 505 FunFam Cytochrome P450 83B1 20 494 - -
Rops4g01198 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01198 Rops-Chr4 32489305 32491521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01198 19 495 Cytochrome P450 AT4G31500 46.667 4.42e-162 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01198 - - lja:Lj3g3v1475790.2 725.702