Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01197 ATGATGAAAAAGATATCTGAGCATGCTGCTTCTTCGGTTGTTTCAAACTTGAGTGAGCTACTTATTTCACTCTCAATCACTACAGTATGTAGGATTACATTTGGGAGAAGGTATGAGGAGGAAGGAACTGAAAGGAGTAAGTTTCATGGGATGCTCAATGAGTTTCAGGCTATGTTGATGGCCTTCTATGTTTCAGATTATATTCCATTCTTGGGGTGGATTGATAAACTCACAGGATTGAATGCCCGTCTAGAACGAATTTTTAAGGAGTTTGATAAGTTCTACCAAGAGGTCATTGATGAACATATTGATCCCAATAGACAGAGAACAGAGGAAGAGGATATAGTTGATGTCTTACTTCAATTGAAGAAACAGCCTTCGTTTTCAATTGATCTCACTTTTGATCACATCAAAGGGATTCTCATGAACATGCTTGTCGCTGCAACGGATGCCACTTCAGCCACAGCAGTTTGGGCTATGACCGCTCTAATAAAAAATCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATCAGGAACTTGGGAGAGAGAAAAGATTTCTTCGACGAAGATGATATTCAAAAGTTTACCTATTTGAAGGCAGTGATAAAAGAGACACTGAGATTGCACCTACCAGCCCCACTACTTCTGCCAAGAGAATCGAATGAAAAGTGCACTATAAGTGGCTACCAAATTCCGGCCAAGACACTGGTATATGTGAATGCTTGGGCTATTCATAGAGACCCTGAGTTTTGGAAAGACCCAGAAGAGTTTTATCCTGAGAGATTCTTAGACAGTTCTATAAACTTTCAGGGACAAGATTTTGAACTAATTCCATTTGGAGCAGGCCGTAGAATTTGCCCAGGTATCCCAATGGCCATTGCATCATTGGAACTTATCCTTGCTAATCTTCTTCATTCCTTTGATTGGGAATTGCCAGATGGGTTGGTAAAGGAAGACATCGATACTGAAATGTTGCCAGGAATTACTCAACATAAGAAGAATCCTCTTTGCCTTTTGCCAAGAGCCGTATATAATTGCCAGATAGACCTGTAA 1053 0.3998 MMKKISEHAASSVVSNLSELLISLSITTVCRITFGRRYEEEGTERSKFHGMLNEFQAMLMAFYVSDYIPFLGWIDKLTGLNARLERIFKEFDKFYQEVIDEHIDPNRQRTEEEDIVDVLLQLKKQPSFSIDLTFDHIKGILMNMLVAATDATSATAVWAMTALIKNPRVMKKVQEEIRNLGERKDFFDEDDIQKFTYLKAVIKETLRLHLPAPLLLPRESNEKCTISGYQIPAKTLVYVNAWAIHRDPEFWKDPEEFYPERFLDSSINFQGQDFELIPFGAGRRICPGIPMAIASLELILANLLHSFDWELPDGLVKEDIDTEMLPGITQHKKNPLCLLPRAVYNCQIDL* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01197 350 PRINTS P450 superfamily signature 147 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 PRINTS P450 superfamily signature 286 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 PRINTS P450 superfamily signature 277 286 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 PRINTS P450 superfamily signature 200 211 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 Coils Coil 170 190 - -
Rops4g01197 350 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 279 288 IPR017972 GO:0005506|GO:0016705
Rops4g01197 350 Gene3D Cytochrome P450 1 343 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 PRINTS E-class P450 group I signature 136 153 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 PRINTS E-class P450 group I signature 156 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 PRINTS E-class P450 group I signature 24 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 PRINTS E-class P450 group I signature 199 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 PRINTS E-class P450 group I signature 240 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 PRINTS E-class P450 group I signature 276 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 PRINTS E-class P450 group I signature 286 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 SUPERFAMILY Cytochrome P450 2 339 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01197 350 PANTHER CYTOCHROME P450 71B11-RELATED 1 341 - -
Rops4g01197 350 FunFam Predicted protein 145 338 - -
Rops4g01197 350 Pfam Cytochrome P450 1 334 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01197 Rops-Chr4 32463583 32465474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01197 1 340 Cytochrome P450 AT4G31500 48.105 3.56e-115 341
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01197 - - gmx:100778293 517.309