LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops4g01196	ATGGAGTCACCACTTCTATTTGTTTTATGCCTGACTCTTCCTCTGCTTCTCTTGCTCTTCTTCCACAAACATAGAAACATTAACAACGTGCCGTGTCTACCTGGTCCTAGAGGCCTTCCCATAATCGGGAATCTTCATCAGCTGGATAACTCTGCTCTTCCTCTGCAACTATGGCAACTCTCAAAGATACATGGCCCCCTGTTTTCTCTTAAACTTGGTTTAAGGCCAGCTATTGTTGTATCTTCAGCTAAAATTGCCAAAGAGGTACTAAAAAACAATGACCTTGTGTTTTCTGATCGACCTAACTTTCGTGGCCAACAGAAGTTATCCTATAATAGGTTAGATATTACATTTTCCCCATACAATGATTATTGGAGAGAAATCAGAAAAATTTGTGTAGTCCATATCTTTAGCTCCAAGAGAGTCTCACGCTTTTCCTCTATAAGAAAGTCTGAGGTCAAGCAAATGATCAAAACGATATCTGGGCACGCTGCTTCTTCAGTTGTTACAAACTTGAGCGAGTTACTGATTTCACTCTCAAACACCATGATATGTAGGATTGCTTTTGGGATAAGGTATGGGATGGAAGGAACTGAACAGAGCAGGTTCCATGGGATGCTCAAAGAGTTTGAGGACATGATGATTGCTTTCTTTGTTTCAGATTATATTCCATTCATGGGCTGGATTGATAAACTCACAGGATTGCATGCACGTCTCGAACGAACTTTCAAGGAGTTTGATAAGTTCTACCAAGAAGTCATTGATGAACACATGGATCCTCATAGACAGCGAACAGAGGAAGAGGATATAGTTGATGTCTTACTTCAACTGAAGAAACAACGTTCGTTTTCAATTGATCTCACTTTTGATCACATCAAAGCTGTTCTCATGGACATGCTTGTAGCTGCAACGGATACCACTTCAGCCGCAGCAGTTTGGGCTATGACCTCCCTAATAAAATACCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGGAACTTGGGAGGGAAAAAAGATTTCTTAGATGAAGATGATACTCAAAGGTTTCCCTATTTGAAGGCAGTGATAAAAGAGACACTAAGGTTGCACGTACCAGTCCCACTACTCGTGCCAAGAGAATCGAATGAAAAGTGCACTATAAGTGGCTACGAAATTCCGGCCAAGACATTAGTGTATGTGAATGCTTGGGCTATTCATAGAGACCCTAATGTTTGGAAAGACCCAGAAGAGTTTTATCCAGAGAGATTCTTAAACAATTCTATAAACTTTCATGGACAAGATTTCGAGCTGATTCCTTTTGGAGCAGGCCGTAGGATTTGCCCAGGGATGCCTATGGCGATAGCATCATTGGAACTTACCCTTGCTAATCTTCTTCATTCATTTGATTGGGAATTGCCACATGGGTTGCTAAAGGAAGACATTGATACTGAAAGGTCGCCAGGACTTGTTCAGCACAAGAAGAATCCTCTTTGCCTCTTTCCCAAGAGCCGTACTATGGCACCTAAGCGCCAGCGGACCAGCAGTAGTGCCATTCCATCTCATTCGGCAGCTGAGGTTGACAGGCTCCTTCAGTTTAACACACCAGCTGAGAGGAAGAAGTGTGATCTGTTCCGTACTTACGAGTTCTCTGCTAACAAGTATTTGCATCAGCATACTATGGAGCAGTTCGGTGTCTCTGATATCATCCATCATCACTTGGCTCGAGCGGGCTGGGAGTTATTTGCCTCTATTCAATGTGATGCATATCTGGAGCCGACTCTTGAGTTCCTATCCACCCTCACTGTTTCATGTGAGAATCAGACTATTGACCATCCAGGCACCATCCAGTTCCGCCTTAACAGGCGCCAGTTTTCTATGTCGTTGAATGAGTTCAACGTTGCTATCGGATTTGAGACTGCTAAATCCATCCTTCTACCAGCATATCAGAATGCTTTTCTAGATTTTCTGTCCACATTCATTGATGGTCACCATTGTAACCTTGGTTACTGGTTTCTTCAGTCTGTTCAGAAGCTAGAGAAGCCCAAAGGGAATGCCAAGAAGAGATACATTCCAGTTGGGTCCTACATCTCTAACTTGGCCAGGAATCTTAATGCTCTTCATCCACATGCCCATCTGGTTAAGCAGATGGAGCCCATAGATGAAGACATGCTGAACAGGTTGAAGATGATACATGAGATCGCTCCAGGACAGTGGGCACTTCAGGATGGACCTATTCCAGAGCAGCAACCTCCACCAGCTGATGATCATGCCGGCCCTGCTGATGACATTCCTCCACCACCTGTGGCTCCTCAGATGCACCCTGATGTGCATGACAGGCTTGCTCGTCTAGAGACTGATCAGATAGACTTCCGCCATCAGGTTTTGACCGACCTAGCACGGATGGATGCAGATCAGGCAGCCTTTCACCACCAGGTGCTGACAGACTTATCCAGGATGGAGGCTGATCAGACCAGCTTTAGGGAGAGTGTTACTGATCAGCTGGATCAGTTGTTTTCATTGTTGTCTACCCGTCTACCTCTTCCATGA	2529	0.4413	MESPLLFVLCLTLPLLLLLFFHKHRNINNVPCLPGPRGLPIIGNLHQLDNSALPLQLWQLSKIHGPLFSLKLGLRPAIVVSSAKIAKEVLKNNDLVFSDRPNFRGQQKLSYNRLDITFSPYNDYWREIRKICVVHIFSSKRVSRFSSIRKSEVKQMIKTISGHAASSVVTNLSELLISLSNTMICRIAFGIRYGMEGTEQSRFHGMLKEFEDMMIAFFVSDYIPFMGWIDKLTGLHARLERTFKEFDKFYQEVIDEHMDPHRQRTEEEDIVDVLLQLKKQRSFSIDLTFDHIKAVLMDMLVAATDTTSAAAVWAMTSLIKYPRVMKKVQEEIRNLGGKKDFLDEDDTQRFPYLKAVIKETLRLHVPVPLLVPRESNEKCTISGYEIPAKTLVYVNAWAIHRDPNVWKDPEEFYPERFLNNSINFHGQDFELIPFGAGRRICPGMPMAIASLELTLANLLHSFDWELPHGLLKEDIDTERSPGLVQHKKNPLCLFPKSRTMAPKRQRTSSSAIPSHSAAEVDRLLQFNTPAERKKCDLFRTYEFSANKYLHQHTMEQFGVSDIIHHHLARAGWELFASIQCDAYLEPTLEFLSTLTVSCENQTIDHPGTIQFRLNRRQFSMSLNEFNVAIGFETAKSILLPAYQNAFLDFLSTFIDGHHCNLGYWFLQSVQKLEKPKGNAKKRYIPVGSYISNLARNLNALHPHAHLVKQMEPIDEDMLNRLKMIHEIAPGQWALQDGPIPEQQPPPADDHAGPADDIPPPPVAPQMHPDVHDRLARLETDQIDFRHQVLTDLARMDADQAAFHHQVLTDLSRMEADQTSFRESVTDQLDQLFSLLSTRLPLP*	843

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops4g01196	842	SUPERFAMILY	Cytochrome P450	34	498	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops4g01196	842	Gene3D	Cytochrome P450	19	499	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops4g01196	842	CDD	CYP71-like	64	491	-	-
	Rops4g01196	842	MobiDBLite	consensus disorder prediction	734	768	-	-
	Rops4g01196	842	MobiDBLite	consensus disorder prediction	739	766	-	-
	Rops4g01196	842	PRINTS	E-class P450 group I signature	179	197	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops4g01196	842	PRINTS	E-class P450 group I signature	291	308	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops4g01196	842	PRINTS	E-class P450 group I signature	354	372	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops4g01196	842	PRINTS	E-class P450 group I signature	431	441	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Rops4g01196	842	PRINTS	E-class P450 group I signature	61	80	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops4g01196	Rops-Chr4	32436105	32451720	Dispersed/Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops4g01196	19	495	Cytochrome P450	AT4G31500	47.500	2.14e-162	480

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops4g01196	-		-	lja:Lj3g3v1475790.2	723.005

Showing 1 to 1 of 1 entries