Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01196 ATGGAGTCACCACTTCTATTTGTTTTATGCCTGACTCTTCCTCTGCTTCTCTTGCTCTTCTTCCACAAACATAGAAACATTAACAACGTGCCGTGTCTACCTGGTCCTAGAGGCCTTCCCATAATCGGGAATCTTCATCAGCTGGATAACTCTGCTCTTCCTCTGCAACTATGGCAACTCTCAAAGATACATGGCCCCCTGTTTTCTCTTAAACTTGGTTTAAGGCCAGCTATTGTTGTATCTTCAGCTAAAATTGCCAAAGAGGTACTAAAAAACAATGACCTTGTGTTTTCTGATCGACCTAACTTTCGTGGCCAACAGAAGTTATCCTATAATAGGTTAGATATTACATTTTCCCCATACAATGATTATTGGAGAGAAATCAGAAAAATTTGTGTAGTCCATATCTTTAGCTCCAAGAGAGTCTCACGCTTTTCCTCTATAAGAAAGTCTGAGGTCAAGCAAATGATCAAAACGATATCTGGGCACGCTGCTTCTTCAGTTGTTACAAACTTGAGCGAGTTACTGATTTCACTCTCAAACACCATGATATGTAGGATTGCTTTTGGGATAAGGTATGGGATGGAAGGAACTGAACAGAGCAGGTTCCATGGGATGCTCAAAGAGTTTGAGGACATGATGATTGCTTTCTTTGTTTCAGATTATATTCCATTCATGGGCTGGATTGATAAACTCACAGGATTGCATGCACGTCTCGAACGAACTTTCAAGGAGTTTGATAAGTTCTACCAAGAAGTCATTGATGAACACATGGATCCTCATAGACAGCGAACAGAGGAAGAGGATATAGTTGATGTCTTACTTCAACTGAAGAAACAACGTTCGTTTTCAATTGATCTCACTTTTGATCACATCAAAGCTGTTCTCATGGACATGCTTGTAGCTGCAACGGATACCACTTCAGCCGCAGCAGTTTGGGCTATGACCTCCCTAATAAAATACCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGGAACTTGGGAGGGAAAAAAGATTTCTTAGATGAAGATGATACTCAAAGGTTTCCCTATTTGAAGGCAGTGATAAAAGAGACACTAAGGTTGCACGTACCAGTCCCACTACTCGTGCCAAGAGAATCGAATGAAAAGTGCACTATAAGTGGCTACGAAATTCCGGCCAAGACATTAGTGTATGTGAATGCTTGGGCTATTCATAGAGACCCTAATGTTTGGAAAGACCCAGAAGAGTTTTATCCAGAGAGATTCTTAAACAATTCTATAAACTTTCATGGACAAGATTTCGAGCTGATTCCTTTTGGAGCAGGCCGTAGGATTTGCCCAGGGATGCCTATGGCGATAGCATCATTGGAACTTACCCTTGCTAATCTTCTTCATTCATTTGATTGGGAATTGCCACATGGGTTGCTAAAGGAAGACATTGATACTGAAAGGTCGCCAGGACTTGTTCAGCACAAGAAGAATCCTCTTTGCCTCTTTCCCAAGAGCCGTACTATGGCACCTAAGCGCCAGCGGACCAGCAGTAGTGCCATTCCATCTCATTCGGCAGCTGAGGTTGACAGGCTCCTTCAGTTTAACACACCAGCTGAGAGGAAGAAGTGTGATCTGTTCCGTACTTACGAGTTCTCTGCTAACAAGTATTTGCATCAGCATACTATGGAGCAGTTCGGTGTCTCTGATATCATCCATCATCACTTGGCTCGAGCGGGCTGGGAGTTATTTGCCTCTATTCAATGTGATGCATATCTGGAGCCGACTCTTGAGTTCCTATCCACCCTCACTGTTTCATGTGAGAATCAGACTATTGACCATCCAGGCACCATCCAGTTCCGCCTTAACAGGCGCCAGTTTTCTATGTCGTTGAATGAGTTCAACGTTGCTATCGGATTTGAGACTGCTAAATCCATCCTTCTACCAGCATATCAGAATGCTTTTCTAGATTTTCTGTCCACATTCATTGATGGTCACCATTGTAACCTTGGTTACTGGTTTCTTCAGTCTGTTCAGAAGCTAGAGAAGCCCAAAGGGAATGCCAAGAAGAGATACATTCCAGTTGGGTCCTACATCTCTAACTTGGCCAGGAATCTTAATGCTCTTCATCCACATGCCCATCTGGTTAAGCAGATGGAGCCCATAGATGAAGACATGCTGAACAGGTTGAAGATGATACATGAGATCGCTCCAGGACAGTGGGCACTTCAGGATGGACCTATTCCAGAGCAGCAACCTCCACCAGCTGATGATCATGCCGGCCCTGCTGATGACATTCCTCCACCACCTGTGGCTCCTCAGATGCACCCTGATGTGCATGACAGGCTTGCTCGTCTAGAGACTGATCAGATAGACTTCCGCCATCAGGTTTTGACCGACCTAGCACGGATGGATGCAGATCAGGCAGCCTTTCACCACCAGGTGCTGACAGACTTATCCAGGATGGAGGCTGATCAGACCAGCTTTAGGGAGAGTGTTACTGATCAGCTGGATCAGTTGTTTTCATTGTTGTCTACCCGTCTACCTCTTCCATGA 2529 0.4413 MESPLLFVLCLTLPLLLLLFFHKHRNINNVPCLPGPRGLPIIGNLHQLDNSALPLQLWQLSKIHGPLFSLKLGLRPAIVVSSAKIAKEVLKNNDLVFSDRPNFRGQQKLSYNRLDITFSPYNDYWREIRKICVVHIFSSKRVSRFSSIRKSEVKQMIKTISGHAASSVVTNLSELLISLSNTMICRIAFGIRYGMEGTEQSRFHGMLKEFEDMMIAFFVSDYIPFMGWIDKLTGLHARLERTFKEFDKFYQEVIDEHMDPHRQRTEEEDIVDVLLQLKKQRSFSIDLTFDHIKAVLMDMLVAATDTTSAAAVWAMTSLIKYPRVMKKVQEEIRNLGGKKDFLDEDDTQRFPYLKAVIKETLRLHVPVPLLVPRESNEKCTISGYEIPAKTLVYVNAWAIHRDPNVWKDPEEFYPERFLNNSINFHGQDFELIPFGAGRRICPGMPMAIASLELTLANLLHSFDWELPHGLLKEDIDTERSPGLVQHKKNPLCLFPKSRTMAPKRQRTSSSAIPSHSAAEVDRLLQFNTPAERKKCDLFRTYEFSANKYLHQHTMEQFGVSDIIHHHLARAGWELFASIQCDAYLEPTLEFLSTLTVSCENQTIDHPGTIQFRLNRRQFSMSLNEFNVAIGFETAKSILLPAYQNAFLDFLSTFIDGHHCNLGYWFLQSVQKLEKPKGNAKKRYIPVGSYISNLARNLNALHPHAHLVKQMEPIDEDMLNRLKMIHEIAPGQWALQDGPIPEQQPPPADDHAGPADDIPPPPVAPQMHPDVHDRLARLETDQIDFRHQVLTDLARMDADQAAFHHQVLTDLSRMEADQTSFRESVTDQLDQLFSLLSTRLPLP* 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01196 842 SUPERFAMILY Cytochrome P450 34 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 Gene3D Cytochrome P450 19 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 CDD CYP71-like 64 491 - -
Rops4g01196 842 MobiDBLite consensus disorder prediction 734 768 - -
Rops4g01196 842 MobiDBLite consensus disorder prediction 739 766 - -
Rops4g01196 842 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 Pfam ATHILA ORF-1 family 536 656 IPR004312 -
Rops4g01196 842 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Rops4g01196 842 PANTHER CYTOCHROME P450 71B11-RELATED 17 496 - -
Rops4g01196 842 Pfam Cytochrome P450 34 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 Coils Coil 325 345 - -
Rops4g01196 842 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01196 842 FunFam Cytochrome P450 83B1 20 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01196 Rops-Chr4 32436105 32451720 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01196 19 495 Cytochrome P450 AT4G31500 47.500 2.14e-162 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01196 - - lja:Lj3g3v1475790.2 723.005