Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01194 ATGGAGGTTGGAGGTTCCTCCACTACAGTCCAAAATCATGAGGTGGACCAATCTGGAACTGATGACGACTCGTTGAGTCTGGATAACTCCGAACCCACCATCAAAAGACAGAAGATAAATGACCGGGGGAAGTCCATGGTGGTGGTCGATTTGGAGGAAGAAGCTCCGTTGGAATTACAATATTGTAATGTGGGACTTATTCCCTATGGAAAACACCACACAAATCGGTGGTGGATTTGGCTCATAATTGGGGTGGGAGCAGCCCTTGCAATACCTGTGATCGTCTATTCAATCCGAGCCTTGTGGAAAAAATACAAAGCAGAAGTGAATAGAAAAAAGTTGCTGAAGGAGCTATTACATGAGATTGGAGGTAATGCAATGCTTTCAATGGTATACGGCAAAGCCAGAACAAGTAAAAACAGGGAAAAGACAAGCAATGAGGTCCAAATATTCACTTTCGAAAGCATCGCTGCTGCCACAAACAATTTCTCAGCTGCTAATAAGCTAGGAGAGGGTGGTTTTGGTCCTGTTTTTAAGGGAAGACTAAGTGATCAGCAAGAGGTAGCAATGAAGCGACTTTCTAAAAGTTCAGGACAGGGGCTGATAGAGTTTAAGAATGAAGCTAAACTCATGGCCAAACTCCAGCACACTAATCTTGTAAAGCTTTTAGGGTTCTGTATCCAGAGAGATGAAAGAATATTAGTCTATGAGTACATGTCTAACAAGAGTTTAGACTTCTACCTATTTGATTCAACTAGAAAAAATTTGCTGGACTGGAAAAAACGCTTAAACATCATTGGAGGCATCGCTCAAGGACTTCTTTATCTTCACAAGTATTCAAGATTAAAGGTGATACATCGAGACCTGAAACCAAGCAATATATTACTTGATGAAGAGATGAATCCAAAAATATCCGACTTTGGCATGGCTCGAATATTTGGTCTAAGAGTATCAGAAGAAAACACAAATAGAGTTGTTGGTACTTATGGTTACATGGCTCCAGAGTATGCAATAAATGGTGTTGTGTCTACCAAAATAGATGTGTTTAGCTTTGGTGTCCTGCTATTAGAGATTCTAAGTGGCAAGAAGAATAATAGTCACTATCATTTGGATCACCCACTCAACCTCATAGGATATGCATGGCATCTCTGGAATGAAGGTAAAGCTCTGGAGCTAGTAGACCCAGCATTAAATGAATTAAGTACTCAGAATGAAGTTATGAGATGTATTCATATTGGCCTCTTGTGTGTACAAGATCAAGCAAAAGATAGACCTACCATGTTAGATATAGTTTCTTTTCTATCAAATGATACAATCCAACTTCCCCAACCAAAGCAGCCAGCATTCTTCATCAATGTTGTTGTAGAAGAGTCAGAGCTTCCTTACAGCAGGCAAGAACATCATTCCTTAAATGATGTAACAATTTCTAGCATGGGTGGAAGATAA 1446 0.3997 MEVGGSSTTVQNHEVDQSGTDDDSLSLDNSEPTIKRQKINDRGKSMVVVDLEEEAPLELQYCNVGLIPYGKHHTNRWWIWLIIGVGAALAIPVIVYSIRALWKKYKAEVNRKKLLKELLHEIGGNAMLSMVYGKARTSKNREKTSNEVQIFTFESIAAATNNFSAANKLGEGGFGPVFKGRLSDQQEVAMKRLSKSSGQGLIEFKNEAKLMAKLQHTNLVKLLGFCIQRDERILVYEYMSNKSLDFYLFDSTRKNLLDWKKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKPSNILLDEEMNPKISDFGMARIFGLRVSEENTNRVVGTYGYMAPEYAINGVVSTKIDVFSFGVLLLEILSGKKNNSHYHLDHPLNLIGYAWHLWNEGKALELVDPALNELSTQNEVMRCIHIGLLCVQDQAKDRPTMLDIVSFLSNDTIQLPQPKQPAFFINVVVEESELPYSRQEHHSLNDVTISSMGGR* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01194 481 MobiDBLite consensus disorder prediction 1 15 - -
Rops4g01194 481 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Rops4g01194 481 ProSiteProfiles Protein kinase domain profile. 163 439 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01194 481 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 72 477 - -
Rops4g01194 481 Pfam Protein kinase domain 165 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01194 481 SUPERFAMILY Protein kinase-like (PK-like) 145 462 IPR011009 -
Rops4g01194 481 Gene3D Transferase(Phosphotransferase) domain 1 239 445 - -
Rops4g01194 481 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 128 238 - -
Rops4g01194 481 Gene3D Phosphorylase Kinase; domain 1 136 238 - -
Rops4g01194 481 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 239 442 - -
Rops4g01194 481 CDD STKc_IRAK 169 434 - -
Rops4g01194 481 MobiDBLite consensus disorder prediction 1 34 - -
Rops4g01194 481 Pfam Domain of unknown function (DUF3403) 436 481 IPR021820 GO:0004674
Rops4g01194 481 SMART serkin_6 163 434 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01194 Rops-Chr4 32342919 32350227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01194 127 459 Receptor kinase-like Gene Family AT4G23190 55.172 2.81e-131 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops4g01194 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01194 - - lang:109358482 696.812