Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01193 ATGGTGTCTCAACTTCTACTTGTTTTATGCTTAACTCTTCCTCTGCTTCTCTTGTTCTTCTACCAGAAAAGTAGAACCATTAACCACGTTCCCCATCCACCTGGTCCTAGAGGCCTTCCCATAATTGGGAATCTTCATCAGCTGGATAATACTATTCTTTATCTGCAGCTATGGCAACTCTCAAAGATATATGGGCCTCTGTTTTCTCTTCAACTCGGTTTAAGGCCAGCTATTGTAGTTTCTTCAGCAAAAATTGCTGGAGAGGTACTGAAAAACAATGACCTTGTGTTTTCTGATCGACCAAGCTTACTTGGCCAAAAGAAGTTGTCCTATAATGGTCAGATATTGCATTTTCCCCATACAATGATTATTGGAGAGAAATCAGAACAATTTGCATGGTCCATATCTTCAGCTCCAAGCGTGTTTCAAGCTTTTCCTCTGTAA 444 0.4032 MVSQLLLVLCLTLPLLLLFFYQKSRTINHVPHPPGPRGLPIIGNLHQLDNTILYLQLWQLSKIYGPLFSLQLGLRPAIVVSSAKIAGEVLKNNDLVFSDRPSLLGQKKLSYNGQILHFPHTMIIGEKSEQFAWSISSAPSVFQAFPL* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01193 147 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01193 147 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01193 147 PANTHER CYTOCHROME P450 FAMILY 1 5 118 - -
Rops4g01193 147 Pfam Cytochrome P450 33 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01193 147 Gene3D Cytochrome P450 19 128 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01193 147 SUPERFAMILY Cytochrome P450 32 116 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01193 Rops-Chr4 32329725 32330168 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01193 6 118 Cytochrome P450 AT4G31500 46.018 3.95e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01193 - - lja:Lj3g3v1475760.1 166.007