Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01189 ATGCTCCTCACTATTGCATTCCAATTTACTTTCAAGAACCATTTGCGGGACAACGTGGCTGCTATGGCTCGCCAGTATGTGCGTAGCGTTGTGGGGTCTGTTCAGCAGGTTGCCATGGCTATCGCTCCTTCTAGGCTCAGCACTCAGATGGGGCCAAAGTCGCTTCCCGGTTCACCAGAGGCTCTTACATTGGCACGATGGACCTGTAGAAGCTACAGGATGCACGCTGGTGTTGAGTTTTTTTAG 246 0.5163 MLLTIAFQFTFKNHLRDNVAAMARQYVRSVVGSVQQVAMAIAPSRLSTQMGPKSLPGSPEALTLARWTCRSYRMHAGVEFF* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01189 81 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 2 80 IPR044830 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01189 Rops-Chr4 32235451 32235696 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01189 2 81 Homeobox Transcription Factor Family AT2G34710 65.000 7.92e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01189 K09338 - nnu:104590505 140.969