Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01188 ATGCTTGAAACTACTCTGGTTGCCCTTCTAGATATAATGCTTGATAAAGTCCTTGATGAAGCTGGCAGGAAGATTCTTTGCTATAAGTTCTCCAAGATAATGCAACAGGGAGTTGCATATCTGCCTGCAGGGATATGGGTATCGACTATGAATAGGCCAGTGTCGTATGAGCAGGCCATTGCATGGAAAGTTCTGAATGATGATGACTCCAATCACCGCCATGCCTTGTTCCTCCCATGTCGTTTCATTGGTTGTTAG 258 0.4419 MLETTLVALLDIMLDKVLDEAGRKILCYKFSKIMQQGVAYLPAGIWVSTMNRPVSYEQAIAWKVLNDDDSNHRHALFLPCRFIGC* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01188 85 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 76 IPR044830 GO:0003700
Rops4g01188 85 Pfam MEKHLA domain 1 77 IPR013978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01188 Rops-Chr4 32235067 32235324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01188 1 72 Homeobox Transcription Factor Family AT1G30490 72.222 1.90e-31 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01188 K09338 - gmx:100806322 130.183