Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01187 ATGGTTTCACCGCTTCTACTTGTTCTATGCCTAACTCTTCCTCTGCTTCTATTGTTCTTCATCAAGAAACAGAGAACCATTACCAACGTGCCCCGTCCACCTGGTCCTAGAGGCCTTCCCATAATTGGGAATCTTCATCAGCTGGATGATTCTGTTCTGTATCTGCAACTATGGCAACTCTCAAAGATATATGGGCCTCTATTTTCCCTTCAACTCGGTTTAAGGCCAGCTATTGTAGTTTCTTCAGCTAAAATTGCCAGAGAGGTACTGAAAAACAATGATCATATGTTTTCTGATCGACCAAACTTACGTGGCCAACAAAAGTTGTCGTATAATGGGTCAGAGATTATATTTCCCCCATACAATGATTGTTGGAGAGAAATCAGAAAAATTTGTGTAGTCCATATCTTTAGCTCCAAGCGTGTCTCACGCTTTTACTCTATAAGAAAGTTTGAGGTCAAGCAAATGATGAAAAAGATATCCGAGCATGCTGCTTCTTCGGTTGTTACAAACTTGAGCGATTTGCTGATGTCTCTCTCAAGCACCATAATATGTAGGATTGCTTTTGGGAGAAGGTATGAGGAGGAAGGAACTGAAAGGAGTAAGTTCCATGGGATGCTCAATGAGTGTCAGGCCATGATGTCTGCATTCTTTGTTTCAGATTATATTCCATTCATGGGATGGATCGATAAACTTACAGGATTGCATGCACGTCTCGAGCGAATTTTCAAGGAATTGGATAAATTCTACCAAGAGGTCATTTATGAACACATGGATCCGAATAGAAAGCAGACAGAGGAAGAGGTTATAGTTGATGTCTTACTTCAACTTAAGAAACAACGTTCATTTTCGATTGATCTTTCCTTTGATCACATCAAAGGGGTCCTCATGAACATGCTTGTAGCTGCAACGGATACCACTTCAGCCACATCAGTTTGGGCTATGACCGCCCTAATAAAAAACCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGGACTTTGGGAGGGAACAAAGATTTCTTAGATGAAGATGATATTCAAAAGTTTCCCTATCTGAAAGCAGTGATAAAAGAGACACTTAGATTGCACCTACCAGCCCCACTACTCGTGCCAAGAGAATCAAATGAGAAGTGCACTATAAGTGGCTACCAAATCCCGGCCAAGACACTGGTATATGTGAATGCTTGGGCTATTCATAGAGACCCTGAGGTTTGGAAAAACCCAGAAGAGTTTTATCCTGAGAGATTCTTAGACAGTTCTATAAATTATCAGGGGCAAGATTTTGAGCTGATTCCATTTGGAGCAGGCCGTAGGATTTGCCCAGGGATGCCTATGGCGATAGCATCATTGGAACTTATCCTTGCAAATCTTCTTCATTCCTTTGATTGGGAATTGACAGATGGGTTGGTGAAGGAAGACATTGATATGGAAATGTTGCCAGGAGTTACTCAACACAAGAAGAATCCTCTTTGCCTTTGTGCCAAGAATCCTATGTAA 1500 0.4107 MVSPLLLVLCLTLPLLLLFFIKKQRTITNVPRPPGPRGLPIIGNLHQLDDSVLYLQLWQLSKIYGPLFSLQLGLRPAIVVSSAKIAREVLKNNDHMFSDRPNLRGQQKLSYNGSEIIFPPYNDCWREIRKICVVHIFSSKRVSRFYSIRKFEVKQMMKKISEHAASSVVTNLSDLLMSLSSTIICRIAFGRRYEEEGTERSKFHGMLNECQAMMSAFFVSDYIPFMGWIDKLTGLHARLERIFKELDKFYQEVIYEHMDPNRKQTEEEVIVDVLLQLKKQRSFSIDLSFDHIKGVLMNMLVAATDTTSATSVWAMTALIKNPRVMKKVQEEIRTLGGNKDFLDEDDIQKFPYLKAVIKETLRLHLPAPLLVPRESNEKCTISGYQIPAKTLVYVNAWAIHRDPEVWKNPEEFYPERFLDSSINYQGQDFELIPFGAGRRICPGMPMAIASLELILANLLHSFDWELTDGLVKEDIDMEMLPGVTQHKKNPLCLCAKNPM* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01187 499 CDD CYP71-like 64 491 - -
Rops4g01187 499 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PANTHER CYTOCHROME P450 71B11-RELATED 14 495 - -
Rops4g01187 499 FunFam Cytochrome P450 83B1 19 494 - -
Rops4g01187 499 SUPERFAMILY Cytochrome P450 33 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 Gene3D Cytochrome P450 22 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 Pfam Cytochrome P450 33 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01187 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01187 Rops-Chr4 32206595 32208811 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01187 6 494 Cytochrome P450 AT4G31500 46.545 3.60e-167 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01187 - - gmx:100801312 760.755