Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01185 ATGGAGTCACTTCTCCTCTTCCTATGCCTAGCTCTTCCTGTGTTACTACTATTCTTCTTCTTCCAAAAGCATAGAGCCATAAAGAACCCAGCATGTCCACCTGGTCCTAGAGGCCTACCTATAATTGGAAATCTTCATCAGCTTTATAACTCTCCCCTTCATTTGAAGCTATGGCAGTTCTCAAAGACACATGGCCCCTTATTTTCACTTCAACTCGGTTTAAGACCTGCCCTTGTTGTCTCCTCCTCAACAATGGCCCAAAAAGTACTCAAAATCCATGACCTTGAGTTTTGTGGCAGACCATCCTTTCTAAGCCAACAAAAACTGTTCTACAATAGGGTGGAGATGGTATTTTCCCCTTACAATGATTCTTGGAAAACAATAAAAAAAATTTGCACTGTCCATGTCTTTAACTTGAGCCGTGTCTCAAGCTTCTCCTCTATAAGACAATTTGAGATCAACAAAATGATTAAAAAGATATCAATGCAAGCTGCTTCTTCAAAAGCTACTAATTTGAGTGAAATGGTGATGTCTCTTACAAACTCTATAATCTGTAGAATTGCTTTTGATAGAAGATGTGAAGAAGAAGAAGGAAGAACCAAAGGGAGTAGTTACCTTAGCCTGCTTAATGAAACGCAGACTTTGATGGGAACACTCTTTGTTTCTGATTATATTCCTTTCATGGGTTGGATTGATAAGCTCAGAGGATTGCATGCTCATCTTGAAAGGAACTTCAAGGAAATGGATGCATTTTTGCAAGAAGTGGTCAACCAACACCTTGATACAACTAGACAAAAATCAGATGAAGAGGATGATATCATTGATGTTTTGCTGAAGCTGAAGAAGCAGAATTCATTTTCATTTGACCTCACTTATGATCAGATCAAAGCTGTGCTCCTGGACATGCTTGTTGGAGGAACATATTCAAGTACTGCCACAGTAACATGGGCCATGGCCAAACTAATGGAAAACCCCAGAGCAATGGTGAAAGCTCAAACAGAAGTTAGAAATTGGTACGGTAGAAGAGGCTCTGTTGATGAAGGTTACATCCAAAAGCTTTCATATCTTAAGGCAGTGATAAAAGAGACACTGAGATTATTCCCTCCAGTGCCACTACTTTTACCCAGAGAAACAAATGAAAAATGCATAATAGAGGGGTATGATATTCAAGCCAAGACATTAGTGTATGTGAATGCATGGGCCATCCAAAGAGATCCTAAAGTTTGGAAAGACCCAGAAGAGTTCTATCCTGAGAGATTCTTAGAGAGTTCAATTGATTTTAAGGGACAAGATTTTGAGTTGATTCCATTTGGTTCAGGGAGAAGAATTTGCCCAGGTTTACAATTGGGAGCTGTCACAGTGGAGATAGTACTTGCAAACCTCCTTTATTGGTTTGATTGGGAAATGCCTAGTGAGATGGAAAAGGAAGACAGAGACAATCAAATGAAGCCAGGACTTATCCAATATAAGAAGAACCCTCTTTTTCTTCTGCCCAAGAATCATATCTAA 1509 0.3943 MESLLLFLCLALPVLLLFFFFQKHRAIKNPACPPGPRGLPIIGNLHQLYNSPLHLKLWQFSKTHGPLFSLQLGLRPALVVSSSTMAQKVLKIHDLEFCGRPSFLSQQKLFYNRVEMVFSPYNDSWKTIKKICTVHVFNLSRVSSFSSIRQFEINKMIKKISMQAASSKATNLSEMVMSLTNSIICRIAFDRRCEEEEGRTKGSSYLSLLNETQTLMGTLFVSDYIPFMGWIDKLRGLHAHLERNFKEMDAFLQEVVNQHLDTTRQKSDEEDDIIDVLLKLKKQNSFSFDLTYDQIKAVLLDMLVGGTYSSTATVTWAMAKLMENPRAMVKAQTEVRNWYGRRGSVDEGYIQKLSYLKAVIKETLRLFPPVPLLLPRETNEKCIIEGYDIQAKTLVYVNAWAIQRDPKVWKDPEEFYPERFLESSIDFKGQDFELIPFGSGRRICPGLQLGAVTVEIVLANLLYWFDWEMPSEMEKEDRDNQMKPGLIQYKKNPLFLLPKNHI* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01185 502 FunFam Cytochrome P450 83B1 19 497 - -
Rops4g01185 502 SUPERFAMILY Cytochrome P450 33 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Rops4g01185 502 PANTHER CYTOCHROME P450 71B11-RELATED 16 499 - -
Rops4g01185 502 CDD CYP71-like 63 494 - -
Rops4g01185 502 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 Gene3D Cytochrome P450 27 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops4g01185 502 Pfam Cytochrome P450 33 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01185 Rops-Chr4 32143510 32146172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01185 6 502 Cytochrome P450 AT4G31500 45.509 6.80e-152 441