Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01179 ATGAAGGCCATGCCCTTACCTTTTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTCTCCTCAGCCTCAGATTCATTTTCACTGCTTTTGCATCATCATCCACAAAAGTGGACCAGAGACAAAGAGGATTGCTATGTGGGCAGCACTGAGCCCACCTCTGTTCTTGACTCCAGAAGAAGCCCAAGCCCTCCTACTTCCTCTTCCACTATGTCCTCCTCTCTTGGTAGCAACAGCACTGGCAAGGGTTCAGCCAACAACACCACAGGTGCAGCCCCAACTGTGTCAGAGAACCCTCCTCATGAAGAAGCCTTGGAAACCAGCCATGAAAAATGTGGTGGCATGCGGATGGAGGACTGGGATGGTCAAGATCAATCTCTTCTGAGATTAATCATGGGTGATGTGGAAGACCCATCTGCAGGATTGAACAAGCTCTTGCAAAGCAGTGGCTGTGGGTCTCAAAGTGTTGATTTCAATGGAGGTTTTGGTGTTGTGGATCAAGGGTTGAATATAGAAACTAATATTGACCCCTCTGTGCAAGGGAATTACCCTGGTTTCCCATTCATTGCTGAGAATATAGATGGCTCCAATGCAAAAACTGGTTCTGTCCCGGTTTCAGAATCCATCTTTTCTGCTTCTGGTAACAATCCTTTTATGGTTTCATCATCTCCGGGTGTGTATAGTTCTCAGCAGCAGCAACAGTTAGGAGTAGTGGATGAGAAACCTCAGGTTATCAATCCAAAGTTTCTGTTAAACCAGAATCAAGTTCAATTCTCAGAGAACCCCTCCTTCTTTGTGCCATTGACATACCCTCAAGTGCAAGAGCAGCAAGTTTTCTCTCACCATCAAGCAAAACGCCCCCTTTTTGATCCTGTTGGGCACAATTACCAGGTTCCAGGGTTACCCCTTTTGGATTCCATGCAAGAGCTGTTTTCTAGGAGGCAGCAAACACAGCTTCCATTGTTTCCTCACCATATGCAACAACAGCAATCATTGATTGTCCCATCTGCAAAACAGCAGAAGGTGAGTTCTACCGGAGATGATGCAAGCCACCAGCTTCAGCAGACTATATTTGATCAGCTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCATGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAAGCCTTTCCAGAGGGCTGCTTTCTACATGAAGGAAGCCTTGCAGTTAATGCTTCATTCAAATATTCACAATTTTTTGGCTTTCTCACCCATTAGTTTCATATTCAAAATTGGAGCTTATAAATCTTTTTCTGAGATATCACCAGTTCTTCAATTTGCCAATTTTACTTGTAATCAAGCCCTCGTTGAAGCTTTGGAAAGGTTTGATAGAATTCACATTATTGATTTTGATATTGGGTTTGGAGTGCAATGGTCTTCTTTTATGCAAGAACTTGCCTTGAGAAGCAATGGTTCACCTTCACTCAGAATTACTGCTGTTGTATCACCATCAACTTGCAACGAAGTTGAACTCAATTTTACCCGAGAGAGTTTGAATCAATATGCAAAAGACATCAACATGTCATTTGAGCTCAACGTTTTGAGCATTGAATCACTGAACTCTCCTTCTTGTCCCCTGACTGGTGCTTTCTTTGATAACGAGGCAATTGGTGTGAATATGCCAGTTTCATGCTTCACAAATCATCCATCATTGTTTCCTTTGGCCCTTCACCTTGTAAAGCAGCTCAGGCCAAAAATTGTGGTCACTTTGGATAGGAACTGTGATCGAATTGATGTACCACTTCCGACCAATGTAGTCCATGTTCTTCAATGTTATTCGGCCTTACTTGAATCATTGGATGCTGTAAACGTCAACCTAGACATGCTCCAAAAGATTGAGAGACATTTCATCCAACCATCCATGAAGAAAATTATATTGGGTCACCATCATTCACAGGACAAATTATCTCCATGGAGGAATCTGTTTATTCAGTCCGGGTTCTCTCCATTCACATTCAGCAACATCACAGAAGCTCAAGCTGAGTGTTTAGTGCAGAGGGCGCCTGTGCGTGGATTTCAAGTGGAAAGAAAGCCTTCATCTCTTGTTCTATGCTGGCAGGGGAAAGAACTTATCTCAGTTTCAACTTGGAGATGCTGA 2145 0.4364 MKAMPLPFEEFQGKGVLDFSSASDSFSLLLHHHPQKWTRDKEDCYVGSTEPTSVLDSRRSPSPPTSSSTMSSSLGSNSTGKGSANNTTGAAPTVSENPPHEEALETSHEKCGGMRMEDWDGQDQSLLRLIMGDVEDPSAGLNKLLQSSGCGSQSVDFNGGFGVVDQGLNIETNIDPSVQGNYPGFPFIAENIDGSNAKTGSVPVSESIFSASGNNPFMVSSSPGVYSSQQQQQLGVVDEKPQVINPKFLLNQNQVQFSENPSFFVPLTYPQVQEQQVFSHHQAKRPLFDPVGHNYQVPGLPLLDSMQELFSRRQQTQLPLFPHHMQQQQSLIVPSAKQQKVSSTGDDASHQLQQTIFDQLYKTAELIEAGNPVHAQGILARLNHQLSPIGKPFQRAAFYMKEALQLMLHSNIHNFLAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALVEALERFDRIHIIDFDIGFGVQWSSFMQELALRSNGSPSLRITAVVSPSTCNEVELNFTRESLNQYAKDINMSFELNVLSIESLNSPSCPLTGAFFDNEAIGVNMPVSCFTNHPSLFPLALHLVKQLRPKIVVTLDRNCDRIDVPLPTNVVHVLQCYSALLESLDAVNVNLDMLQKIERHFIQPSMKKIILGHHHSQDKLSPWRNLFIQSGFSPFTFSNITEAQAECLVQRAPVRGFQVERKPSSLVLCWQGKELISVSTWRC* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01179 714 MobiDBLite consensus disorder prediction 101 117 - -
Rops4g01179 714 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 323 709 IPR005202 -
Rops4g01179 714 Pfam GRAS domain family 358 713 IPR005202 -
Rops4g01179 714 ProSiteProfiles GRAS family profile. 347 713 IPR005202 -
Rops4g01179 714 MobiDBLite consensus disorder prediction 50 94 - -
Rops4g01179 714 MobiDBLite consensus disorder prediction 42 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01179 Rops-Chr4 31973524 31976363 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01179 356 714 GRAS Transcription Factor Family AT4G00150 53.867 6.16e-123 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops4g01179 GRAS 8.5e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01179 - - gmx:100801785 1102.04