Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01177 ATGAAGGCCATGCCCTTTTCTTTTGAGGAATTTCAAGGGAAGGGAGTGTTGGATTTTTCTTCTGCCTCAGATTCATTTTCACTGCTTTTCCATCATCAACAAAAGTGGACAAGAGACAAAGAGGGTTGGTATGTGGGCAGCACTGAGCCCACCTCTGTTCTTGACTCCAGAAGAAGCCCAAACCATTCTACTTCCTCTTCCACTATGTCCTCCTCTCTTGGCAGCAACACCACCAGCAAGGGTGGTTCAACCAATAACACCACAGGTTCAGCCCCAACTGTTTCTCAGAACCCTCCTCGAGAAGCCTTGGAAACCAGCACAGAAAAATGTGGTATGAGAATGGAGGACTGGGAGGGTCAAGATCAATCTATTCTCAGATTAATCATGGGTGATGTTGATGACCCATCTGCAGGATTGAGCAAGCTCTTCCAGAACAGTGGTTGTGGGTCTCAAACTGTTGATTTCAATGGAGGTTTTGGTGTTGCGGATCAAGGGTTGAATATGGTAAGTATTATTGACCCTTCTATGCCTAGGAATTACCCTGGTTTCCCATTTATTGCTGAGAATATAGATGGCCACAATGCAAAGACCGGTTCTTTCTCTGTTGGGGAATCAATTTTTTCTGTTTCTGGTAACAATCCTATGTTGTCATCATCTCCGGGTATATTCAATTCTCAACAGCAGCAAGTTATTGGAGAAATAGATGAGAAACCTCAAGTTGTCAATCCTCAGTTTATTTTGAACCAGAATCAAGTCCAATTTTCAGAGAACCCCTCTTTCTTTGTGCCATTGACATACCCTCAAGTGCAAGAGCAGCAAGTTTTCTCTCAGCATCAAGTTAAACGCCCCATTTTTGACACGGTTGGGCACAATTATCAGGTTCCAAGGTTACCCCTTTTGGATTCTGGGCAAGAGCTATTTGCTAGGAGGCAACAAACTCAGCTTCCATTGTTTCCTCACCATATGCAACAACAGCAATCATTGATTGTGCCATCTGCAAAACAGCAGAAGGTGAGTTCTAATGGAGATGATTCAAGTCACCAGCTTCAGCAGACTATGTTTGATCAGCTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCCGTTCAAGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCCCCAATTGGTAAGCCTTTTCAGAGGGCTGCTTTTTACATGAAGGAAGCCTTGCAGTCATTGCTTCATTCAAACATTCACAATTTCTTGGCTTTCTCACCAATTAGTTTCATATTCAAAATTGGAGCTTATAAATCCTTTTCTGAGATATCACCTGTTCTACAGTTTGCTAACTTTACTTGTAATCAAGCACTCATTGAAGCTGTGGAAAGGTTTGATAGAATTCATATCATTGATTTTGATATTGGATTTGGAGTGCAATGGTCTTCATTTATGCAAGAGCTTGTCCTAAGGAATAATGGTGTGCCTTCACTTAGAGTTACTGCTATTGTATCACCTTCCACTTGTGATGAGGTTGAGCTGAATGTCACACAAGAAAACTTGATTCAATATGCCAAAGACATCAACATGTCATTTGAATTCAATGTTTTGAGTATTGAATCGTTGAACACTCTGTCTGGTCAGTTCTTTGATAATGAGGCAATTGCTGTGAACATGCCAGTTTCTTGTTTCACAAATTATCAACCATTGCTTCCTTCGGTCCTTCGCTTTGTAAAGCAACTAAGGCCAAAAGTAGTGGTCACTGTGGATAGAAATTGTGATAGAATAGATGTACCATTTTCCACCAATGTAGTGCATGCTCTTCAATATTACTTGGCCTTACTAGAATCACTGGATGCTGTAAATGTGAACCTAGATGTCCTCCAAAAGATTGAGATGCATTTCATCCTTCCAGCCATAAAGAAAATGATTCTTGGTTACCACCATTCACAGGAAAAATTGCTTCATTGGAGAAACATGTTTCTTCAATATGGGTTCTCTCCATTCATATTTAGTAACTTCACAGAAGCTCAAGCTGAGTGTTTAGTGCAGAGAGCACCTGTAAGAGGATTTCAACTGGAGAGAAAGCACTCCTCTCTTGTTCTATGCTGGCAAAGGAAAGAACTTATCTCAGTTTCAACTTGGAGATGCTGA 2124 0.4138 MKAMPFSFEEFQGKGVLDFSSASDSFSLLFHHQQKWTRDKEGWYVGSTEPTSVLDSRRSPNHSTSSSTMSSSLGSNTTSKGGSTNNTTGSAPTVSQNPPREALETSTEKCGMRMEDWEGQDQSILRLIMGDVDDPSAGLSKLFQNSGCGSQTVDFNGGFGVADQGLNMVSIIDPSMPRNYPGFPFIAENIDGHNAKTGSFSVGESIFSVSGNNPMLSSSPGIFNSQQQQVIGEIDEKPQVVNPQFILNQNQVQFSENPSFFVPLTYPQVQEQQVFSQHQVKRPIFDTVGHNYQVPRLPLLDSGQELFARRQQTQLPLFPHHMQQQQSLIVPSAKQQKVSSNGDDSSHQLQQTMFDQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFQRAAFYMKEALQSLLHSNIHNFLAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQALIEAVERFDRIHIIDFDIGFGVQWSSFMQELVLRNNGVPSLRVTAIVSPSTCDEVELNVTQENLIQYAKDINMSFEFNVLSIESLNTLSGQFFDNEAIAVNMPVSCFTNYQPLLPSVLRFVKQLRPKVVVTVDRNCDRIDVPFSTNVVHALQYYLALLESLDAVNVNLDVLQKIEMHFILPAIKKMILGYHHSQEKLLHWRNMFLQYGFSPFIFSNFTEAQAECLVQRAPVRGFQLERKHSSLVLCWQRKELISVSTWRC* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01177 707 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 324 702 IPR005202 -
Rops4g01177 707 MobiDBLite consensus disorder prediction 48 111 - -
Rops4g01177 707 Pfam GRAS domain family 355 706 IPR005202 -
Rops4g01177 707 MobiDBLite consensus disorder prediction 49 103 - -
Rops4g01177 707 ProSiteProfiles GRAS family profile. 344 706 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01177 Rops-Chr4 31896427 31899390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01177 355 707 GRAS Transcription Factor Family AT4G00150 56.863 8.96e-131 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops4g01177 GRAS 5.3e-94 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01177 - - gmx:100801785 1030.39