Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01176 ATGACTGGCCCTTCGCAAGAAGAAGAAGAAAATGATTCAAAAGAAGAGGAGAGAGAAGGAAAGGGGAACCGACTTCTAGAAGATGAATCAGATGAGGAGGTTGCATATAAAACAGGGGAGAAGATCCTTGTTGTAGATTTTGAGTTTGACACGGTGGACAATTCGACGGTGCCTCCTTTCTCATGGAAGAAGCTTTGGGTTTTCACTGGGCCTGGGTTCTTGATGAGCATAGCGTTCTTGGATCCAGGGAATCTGGAAGGGGATCTTCAAGCTGGAGCCATCGTCGGTTACTCCCTCCTTTGGCTTTTGATGTGGGCCACCTTCATGGGTTGGAGTTGTAATTACTGCTTCTGA 354 0.4689 MTGPSQEEEENDSKEEEREGKGNRLLEDESDEEVAYKTGEKILVVDFEFDTVDNSTVPPFSWKKLWVFTGPGFLMSIAFLDPGNLEGDLQAGAIVGYSLLWLLMWATFMGWSCNYCF* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01176 117 MobiDBLite consensus disorder prediction 1 33 - -
Rops4g01176 117 MobiDBLite consensus disorder prediction 15 33 - -
Rops4g01176 117 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 21 115 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01176 Rops-Chr4 31806056 31806409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01176 10 110 Inorganic Solute Cotransporters AT1G47240 63.393 3.91e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01176 K21398 - gmx:100795013 162.54