Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01161 ATGACCATGACAGGAACAAGGGACACTGAATGGACTAAACTAGATTGGGATGCCAGAATGAAGGTCGCACATGGAGCTGCTGTGGATTTTGGCTCGAACCGTCTGACCCATGTCTCTGTCAAAAACCCCTCGGGAAATAAAGGCTACCAAGCACCAGAGTTGGTCGATGATACCGAAAAGCTGACCCAGGAGTGTGATGTATATAGCTACGGTGTTATTCTTTTCGAGATGCTGACCGGTGAATCACCAACCGAGGATACAATTTCCATTTCAAAAGTGACGAGAAGTGTTGGGAAGTGGACTAAGGAGCAAGTCTTGGATCATGAGGACCCCATTAGACAAGGATATGAGCTGGTGATGAAATGTTTGTTCCGGAGGTCTCACTTCAGACCTTCAATGGCCAGAGTAGTTAAGAAGATGGAAGAAATCAGAACATCCAATCAATTTTAA 450 0.4533 MTMTGTRDTEWTKLDWDARMKVAHGAAVDFGSNRLTHVSVKNPSGNKGYQAPELVDDTEKLTQECDVYSYGVILFEMLTGESPTEDTISISKVTRSVGKWTKEQVLDHEDPIRQGYELVMKCLFRRSHFRPSMARVVKKMEEIRTSNQF* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01161 149 Gene3D Transferase(Phosphotransferase) domain 1 13 149 - -
Rops4g01161 149 SUPERFAMILY Protein kinase-like (PK-like) 25 143 IPR011009 -
Rops4g01161 149 PANTHER OS01G0253100 PROTEIN 29 143 - -
Rops4g01161 149 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01161 149 Pfam Protein kinase domain 28 138 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01161 Rops-Chr4 31344310 31344852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01161 3 144 Receptor kinase-like Gene Family AT1G48480 28.947 2.57e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Cr-4 Rops4g01161 Pkinase 2.5e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01161 - - tss:122672500 94.7449