Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01160 ATGGCAGAGTCTCTCCTAGTCAAAGCCGCTGTGGGAGCTGCATTTGGGGAATTGCTTAATGCCGTTTTGGAAACAAGAGGTAAGGCCATTTTGTTCAAACAAACCTTGGCCTACCTCCAATACACTCTTGAAGCAATAGCTCCAGTAATCAAAGAGATAGAGCAGCAAAACAATGACTTGGGCCGTCCAAAAGAGGAACTTGAATTGCTGATCAAAAAAATGGAAGAGGGTAAAGAGCTTCTGTGCAAGTGTTCAAAAATTCACAGGCTAAATTTTGTGGCCAGGGTTTGTTACAATGGAAAACTGGAGAAACTAATAGCCTCACTTGTGAAGTTTTTTGCCATTAACATGCAAGCTTACAATTCGAGAGATCAAAAGGAGACCCTGCTTCAGGTTAGAAAAATACTTGGCAGGGTTAATAAATTTCCTTTGGTCAAAGCAGAAAACACAGCTGGTTCATCTTCTTCTGATTCTATCCCTGTGAGTCAATTAGAGATGTATGACTCAACGACCATGCAGCCAGCTGATGAAAATGTAGTTGAAACCAATCATACTGAGAAAGCCATGGAAAATGCCAACCAAGTAACAAGAAATTCATCTTCAGGTTCTGGTTCTGTCTACTTCAGTGGGAATGAGGATGAATCAAGTATCCCTAACTCAACCGAGCCGGTAGAAAATTCAGCCGGGACAAATTCTGCTGAGCAAGACACGAAAGGACTTGTTTTCTTAGATCATTCTTATAGTTTTGATATTGATGAATTAACAAGTGCTTCAAGAGAATTTATAGGGAAGGGAAGTTATGGAACAACATATAAAGCCATCTTGAACGATGGGAGAGAGTTGGCTCTAAAGATGTTAAAAAACGTGGTAGAAAAAAGAGAATTTGAACGCCAAGTGAAGAATGTGCATGCGTTGGTTTCTGAGCACCCAAATGTTATTCCTATTCGCGCTTACTTCTACGGCGATGACGTCAAGATGCTGATTTACGATTATATGATGGCTGGCAGCTTTTTCGAGTTATTGCATGAAGGAACAAGGGACACTGGTTGGACTCAACTAGATTGGGATTCCAGAATGAAGATCGCACATGGAGCTGCTGCGGGCATTGCTCATATCCACTCTGCCAGTACTGTCCATGGCAATATAAAATCATCTAACATACTTGTCACCAAAGACATGAGAGGTTGCATTTCAGATTTTGGTTTGAATCGTCTAACCCGTGACTCTGTAAATCCCTCGGGAAATCATGGCTACCGAGCACCAGAGCTTGTTGATAATACCAGACTACTGCTGACCAAGAAATGTGATGTATATAGCTTTGGTGTTCTCCTGTTCCAGATGCTGACTGATGAATCACCATTATATCCGTTGGTTCTATTAAAGAATAGGTGGGAACAACTACTCTTTGATTCTAAGAACCCCCTTGGAGAAGAACAAGCGTTTAAGGTGGCTGTACTGGCAAGGGAATGCATGAAAGAGAAGCCTCAATCGAGACCTTCAATTGCCGAAGTAGTTAAGAAGATAGCAGAAATAAGAGGATCCAATAAATTTTAG 1554 0.4131 MAESLLVKAAVGAAFGELLNAVLETRGKAILFKQTLAYLQYTLEAIAPVIKEIEQQNNDLGRPKEELELLIKKMEEGKELLCKCSKIHRLNFVARVCYNGKLEKLIASLVKFFAINMQAYNSRDQKETLLQVRKILGRVNKFPLVKAENTAGSSSSDSIPVSQLEMYDSTTMQPADENVVETNHTEKAMENANQVTRNSSSGSGSVYFSGNEDESSIPNSTEPVENSAGTNSAEQDTKGLVFLDHSYSFDIDELTSASREFIGKGSYGTTYKAILNDGRELALKMLKNVVEKREFERQVKNVHALVSEHPNVIPIRAYFYGDDVKMLIYDYMMAGSFFELLHEGTRDTGWTQLDWDSRMKIAHGAAAGIAHIHSASTVHGNIKSSNILVTKDMRGCISDFGLNRLTRDSVNPSGNHGYRAPELVDNTRLLLTKKCDVYSFGVLLFQMLTDESPLYPLVLLKNRWEQLLFDSKNPLGEEQAFKVAVLARECMKEKPQSRPSIAEVVKKIAEIRGSNKF* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01160 517 Gene3D Transferase(Phosphotransferase) domain 1 245 515 - -
Rops4g01160 517 ProSiteProfiles RPW8 domain profile. 1 151 IPR008808 -
Rops4g01160 517 ProSitePatterns Protein kinases ATP-binding region signature. 262 284 IPR017441 GO:0005524
Rops4g01160 517 SUPERFAMILY Protein kinase-like (PK-like) 260 506 IPR011009 -
Rops4g01160 517 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 88 513 IPR046959 -
Rops4g01160 517 Pfam Protein kinase domain 260 506 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01160 517 MobiDBLite consensus disorder prediction 190 233 - -
Rops4g01160 517 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 5 133 IPR008808 -
Rops4g01160 517 ProSiteProfiles Protein kinase domain profile. 256 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01160 Rops-Chr4 31330800 31333774 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01160 210 514 Receptor kinase-like Gene Family AT3G08680 40.964 1.36e-68 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops4g01160 Pkinase 3.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01160 - - csav:115694841 248.44