LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops4g01159	ATGGATACAATGCCGGAAGAATCATTTGTTGATTTGAATGATGATGGGGATTTGAATGATGAGATTCCACCGACAGATTCGGACAATGGGTTACAGAAAAATCCAGGTTATAAGAGTTTGACTGATTTGAATCGTGATGAAATCTTACATTTAGAGTTTGGAAGTGAAGAGGAAGGTATAGATTTTTACAAAAAGTATGCATTGTATCATGGGTTTGTTGATAGGAAAGATGATGTGTACAGAGATGTGAAGGGGAATGTTGTGATGCGCCAATTAGTATGCAATAGAGCTGGTCTAAGAAACAAAAAACATTATGAATGGGTGGACAGAATAAGAGACCACAGACCAATCACGCGGACGAATTGTGAAGCAAAGTTTAGGATCCATTTTAAGTACAGTAGTAAGAAATGGAGGGTTGGATGTTTTGAGAATACACATAACCATAATCTTACAACACCGGAACATGTTCACCTACTCCCTGCATATCGTAGTTTGACATTTGCTGATGAAGCTCAAGTTGATAGCTTGCATGATTATGGTGTGAGGACATGTCATATATTGGGTTTCATGGTAGGTCAGAAATGTGGATATGCAGAGTTAGGATTCTGTAAGAAGGATCTATATAATCATCTTGACAAGAAGAGGCGTGCAAAGGTAGAAGATGGTGATGCATTCGGTGCACTTAGTTATTTGCAAGCTAAGGCGGATAATGATCCTATGTTTACGACTGGAATTTTGGATCTTATTAACTTTTACAGCATAACAGGTTGTATGTTTATTTTCTTCCGATACGTTGGTTCTAATCAATTCGAATTTCGTATAAGGAATGGTCGGTTGATGGAGTTGTTGTACCCTCATCCAATGCCTACCGGGGATGTTGATGTTAACACCAGTGGTGATGATGTGAATCACGGCCACAGGGTCAACGCGAACATCGTCTCAGCAATGGCTGACGAGGCCCGTCGTTTTGATGTTCCCCTCCTACCAAACGAGGGGAATGGGTGTTTCCATTTTAGAGCCAGGGACAAATGGATGAATGAGATTAAATACGTCAATGTTGAAGAATCTGAAACTGTTATTTTAGAGTCCAATCTTGAAGCTGGCAGTGAGATATCAACTGACAAATTACTCTGA	1134	0.3977	MDTMPEESFVDLNDDGDLNDEIPPTDSDNGLQKNPGYKSLTDLNRDEILHLEFGSEEEGIDFYKKYALYHGFVDRKDDVYRDVKGNVVMRQLVCNRAGLRNKKHYEWVDRIRDHRPITRTNCEAKFRIHFKYSSKKWRVGCFENTHNHNLTTPEHVHLLPAYRSLTFADEAQVDSLHDYGVRTCHILGFMVGQKCGYAELGFCKKDLYNHLDKKRRAKVEDGDAFGALSYLQAKADNDPMFTTGILDLINFYSITGCMFIFFRYVGSNQFEFRIRNGRLMELLYPHPMPTGDVDVNTSGDDVNHGHRVNANIVSAMADEARRFDVPLLPNEGNGCFHFRARDKWMNEIKYVNVEESETVILESNLEAGSEISTDKLL*	378

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops4g01159	377	MobiDBLite	consensus disorder prediction	1	37	-	-
	Rops4g01159	377	PANTHER	OS01G0519700 PROTEIN	46	242	-	-
	Rops4g01159	377	MobiDBLite	consensus disorder prediction	1	22	-	-
	Rops4g01159	377	Pfam	FAR1 DNA-binding domain	61	151	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops4g01159	Rops-Chr4	31295157	31309048	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Rops4g01159		FAR1	2.9e-17	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops4g01159	-		-	ccaj:109792835	276.944