Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01158 ATGATGTCTCAAAGGAATCATGGCAAAGGGAAGGCTTCGCAGCATTGGCACCTCAATCAGATTGAAGTCATGCTACGATATACACATCCTAGAAAATTATGCATCAAAGCTGGTAGCAATGGTGGACTTCTTGTTGGTGCTTGCATAAATCAGGACAAAGCTCTTATCACTTATCCTGATTTGGCTTTAAATTGGATGGGAAGTTATGGAGAAACATACAAAGTCATCTTGGAGGATGAGAGAGAGGTGGTTGTGAGGAGGAGGTTAAGCAACGTGGTAGGAAAAAGAGAATTTGAAGAGCAAGTAAAGATTTTGCATACGTTGATTTCTGAGCACCCAAATGTTATTCCCATTAGTGCTTACTGCTACAGCGAGGATGAACAGATTCTGATTTACGACTGCATAATTGATTGCTCCCTTTCCTGGTTATTGCAAGGAAGTAAACTAAATTGGGATTCAAGAATGAAGATTGCACATGGAGCTGCTGTGGGTATTGCACATATCCACTCTGCTGGCATTGTCCATGGCAATATAGAATCATCTAGCATACTTGTCACCAAAGACATGCAAGGTTGCATATATGATTTTGGTTTGAATCGTTTGACTCGAGCCCCAGTCAACCCCTCAGGAAATGAAGGCTACCGAGATGTGTATAGCTTCGGTGTTCTCCTTTTGGAGATGCTGACAGGTGAATCACCAGCCCAAAATACATGGCTGTTTCCAAACGAGGTCCAATGTATTGAGAGGTGGACTAAGCAAGTCTCTGATCCGAAGCTCAAGCTCGATAGAAAATCACTAGTGTTGGATATGTTGCAACTGACAATGGAATGTGTGGAATGGAAGCCTCACTTGAGACCTTCAATGGCGGAAGTAGTTAAGAAGATGGAAAAAATCAGAGGATCTAGTGAATTTCAAGCCAAATAA 924 0.4199 MMSQRNHGKGKASQHWHLNQIEVMLRYTHPRKLCIKAGSNGGLLVGACINQDKALITYPDLALNWMGSYGETYKVILEDEREVVVRRRLSNVVGKREFEEQVKILHTLISEHPNVIPISAYCYSEDEQILIYDCIIDCSLSWLLQGSKLNWDSRMKIAHGAAVGIAHIHSAGIVHGNIESSSILVTKDMQGCIYDFGLNRLTRAPVNPSGNEGYRDVYSFGVLLLEMLTGESPAQNTWLFPNEVQCIERWTKQVSDPKLKLDRKSLVLDMLQLTMECVEWKPHLRPSMAEVVKKMEKIRGSSEFQAK* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01158 307 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 67 302 IPR046959 -
Rops4g01158 307 Gene3D Transferase(Phosphotransferase) domain 1 214 307 - -
Rops4g01158 307 SUPERFAMILY Protein kinase-like (PK-like) 67 295 IPR011009 -
Rops4g01158 307 Gene3D Transferase(Phosphotransferase) domain 1 139 213 - -
Rops4g01158 307 Gene3D Phosphorylase Kinase; domain 1 62 133 - -
Rops4g01158 307 ProSiteProfiles Protein kinase domain profile. 58 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01158 307 Pfam Protein kinase domain 67 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01158 Rops-Chr4 31286179 31293170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01158 67 301 Receptor kinase-like Gene Family AT5G58300 41.948 4.39e-57 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops4g01158 Pkinase 1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01158 - - cave:132163202 201.83