Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01157 ATGCAAAACATGACCATGACAGGAACAAGGGACCCTGGATGGACTCAAGTGGATTGGGATTCCAAAATGAAGATAGCACATGGAGCTGCCGCGGGTACTGTACATATCCACTCTGCCAATATTGTTCATGGCAAAATAAAATCATCTAACGTACTTGTCACCAAAGACGTGCAAGATTGCATATCAGATTTTGGTTTGAATCGTCTGACCCATGTCTCTGTTAACCCCTCGAAAGATGAAGGCTACCAAGCACCAGAGCTTGTTGATAATACCAGACTGCTGACCAAGAAATATGATATATGTAGCTTTGGTGTTCTCCTTTTCGAGATGCTATTCCTGAAGACATGGCAGCGTCCATTGGTCCTATTGAAGAAGACATGGGAACAACTACTCTTTGATTCAAAGAATGCCGATGGAGAAGAACAAGCGTTTAAGGTGGCTGTACTGGCAAGGGAATATATGGAAGAGATGCCTCAATCGAGACCTTCAATGGCCGAAGTAGTTAAGAAGATAGCAGAAATAAGAGGATCCAATAAATTTTAG 543 0.4254 MQNMTMTGTRDPGWTQVDWDSKMKIAHGAAAGTVHIHSANIVHGKIKSSNVLVTKDVQDCISDFGLNRLTHVSVNPSKDEGYQAPELVDNTRLLTKKYDICSFGVLLFEMLFLKTWQRPLVLLKKTWEQLLFDSKNADGEEQAFKVAVLAREYMEEMPQSRPSMAEVVKKIAEIRGSNKF* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01157 180 Pfam Protein tyrosine and serine/threonine kinase 17 171 IPR001245 GO:0004672|GO:0006468
Rops4g01157 180 SMART tyrkin_6 1 171 IPR020635 GO:0004713|GO:0006468
Rops4g01157 180 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 176 IPR046959 -
Rops4g01157 180 SUPERFAMILY Protein kinase-like (PK-like) 13 171 IPR011009 -
Rops4g01157 180 Gene3D Transferase(Phosphotransferase) domain 1 6 179 - -
Rops4g01157 180 ProSiteProfiles Protein kinase domain profile. 1 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01157 Rops-Chr4 31279233 31279775 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01157 3 177 Receptor kinase-like Gene Family AT3G08680 36.869 8.12e-32 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops4g01157 PK_Tyr_Ser-Thr 3.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01157 - - gmx:100810832 131.339