Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01156 ATGGCAGTGTCTCTCGTGTTAGGAGCTGCATTTGGAGAATTGCTTAAGGCCGTTTTGGAAATAGGAGGCAAGGCCATTAAGTTCAAACAAACCTTGGCTGACCTCAGATCTGTTCTAGAAGCAATAGAACCAGTAGTCAAAGAGATAGAGCAGCAAAATATTGACTTGAGGTGTCCAAAAGAGGAACTTGAATCGCTGACAAGTAAAATGGAAGAGGGCACAAAGCTTGTGCACAAGTGTTCAGAAATCCACAGGCGAGATTATTTGGCCAGGTCTCGTTACAATAAGAAACTTGAGGCAATAAACAAATCACTTGCGATGTTTTTCATCATTCATATGCAAGCTCAGACCGCGAGAGATCAAAAGGAGACCCTGTTTAAGGTTAGAAAAATATATAGCAGGATTAATAAATTACCTTTGGTCAACGCAGAAGACACTACTTGTTCATCTTTTGATCCTGTGAATGAGCATGAGCCTGCTGAGAAAGCCATGAAGCCTCCTACCAACATCGCCCAAGAGTCAGCAAGGAAGAGACTCTTGGGTAAGATAGGTGGATTCAATCGTAAAGTTAAGCGACTTCCTCAAGAAGGACTTGTTGTTTTGGATTGTTTTTTCAGTTTTGATATTAATGATTTAAGAAATGGTTCGATTGAATTAATTGGGAAGGGAAGTTATGGGAAAACATATAAAGCCATCTTGAAGGATGGGAGAGAGTTGGTTGTGAAGAGGTTAAGAAAAGTGGTAGAAAAAATAGAATTTGAAAAGCAAGTGAAGATTATGCAAACATTGATTTCTGAGCACCCAAATGTTATTTTCATTCGAGCTTACTACTACGGCAGTGATGAAATGCTACTGATTTACGACTACATGATGGCTGGCAGCTTTTCCAGAGGAACAAGGGACACTGGATGGACTCAACTAGATTGGGATTCCAGAATGAAGATCGCACTTGGAGCTGCTGCGGGTATTGTACACATCCACTCTGTCGGTGCCGTCCATGGCAATATAAAATCATCTAACATACTTGTCACCAAAGACGTGCACGGTTGCATATCAGATTTTGGTTTGACTCGTCTGACCCATATCTCTGTCAACCGTTGGGGAAATAAAGGATATCGAGCACCAGAGCTTGTTGATAATCCCAGAGAGGTGACCCAGAAGTGTGATGTGTATAGCTTCGGTGTTCTCCTTTTGGAGATGCTGAATGGTGAATCACCAGTCCCAAATACACGGCAGGTCTTGTGTGTTGAGAAGTGGACTCAGCTATTCTATGATCCTAAGCACCCTTTTAGAAAAAGACAAGCGTTGCAGATGGTGAAACTGGCAAAGGAATGTTTGAAAGAGATGCCTTACTTGAGACCTTCAATGCCCGAAGTACTTAAAATGATGGAAGAAATCATAGGATGCAATAAATTTTAA 1419 0.4137 MAVSLVLGAAFGELLKAVLEIGGKAIKFKQTLADLRSVLEAIEPVVKEIEQQNIDLRCPKEELESLTSKMEEGTKLVHKCSEIHRRDYLARSRYNKKLEAINKSLAMFFIIHMQAQTARDQKETLFKVRKIYSRINKLPLVNAEDTTCSSFDPVNEHEPAEKAMKPPTNIAQESARKRLLGKIGGFNRKVKRLPQEGLVVLDCFFSFDINDLRNGSIELIGKGSYGKTYKAILKDGRELVVKRLRKVVEKIEFEKQVKIMQTLISEHPNVIFIRAYYYGSDEMLLIYDYMMAGSFSRGTRDTGWTQLDWDSRMKIALGAAAGIVHIHSVGAVHGNIKSSNILVTKDVHGCISDFGLTRLTHISVNRWGNKGYRAPELVDNPREVTQKCDVYSFGVLLLEMLNGESPVPNTRQVLCVEKWTQLFYDPKHPFRKRQALQMVKLAKECLKEMPYLRPSMPEVLKMMEEIIGCNKF* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01156 472 ProSiteProfiles Protein kinase domain profile. 214 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01156 472 PANTHER OS05G0588300 PROTEIN 198 466 - -
Rops4g01156 472 SUPERFAMILY Protein kinase-like (PK-like) 217 466 IPR011009 -
Rops4g01156 472 Gene3D Phosphorylase Kinase; domain 1 210 289 - -
Rops4g01156 472 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 6 133 IPR008808 -
Rops4g01156 472 Gene3D Transferase(Phosphotransferase) domain 1 290 471 - -
Rops4g01156 472 ProSiteProfiles RPW8 domain profile. 1 147 IPR008808 -
Rops4g01156 472 ProSitePatterns Protein kinases ATP-binding region signature. 220 242 IPR017441 GO:0005524
Rops4g01156 472 Pfam Protein kinase domain 217 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01156 Rops-Chr4 31267135 31269526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01156 186 466 Receptor kinase-like Gene Family AT5G58300 42.574 7.81e-71 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops4g01156 Pkinase 8.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01156 - - cave:132191690 255.758