Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01153 ATGGGGTGTTTCACTGTCTTGAAGTGCAAAAAGAAAAAGTTCGATCTAATCATGTGCTCAAAATGTGCCAGCCATAACGAGCGTGTACCTACAGTACTTCCTGAACCTCAAACTCATACTCCCACATTGCAGTCTACAATTCCTAGTTTTGTAACTAGAGTGGAACCCATTCACCCCATTAGTCGAGTTACCAATGACAGAACACGGGCATTATCTGCTCCATTGGCTCTTGATGCTGCAGAACAGGATGCTCTTGCCTCAATTGAGAATCAGGATCAAGAAGTGTCAAAACCCCGAGCAAGATCAATGAAGGAGCAGCGTTCACCTAGTCCACAACCTTTACCTCTTCCATCTCCTCCAGGTGGTGGTGTTTTGAAGGCTACTCTCAGCCTGAAGATGGCTAGTGGTCCCCTATATGCTTATGGATCAGCTCTTGATGCAGCAGAACAAGATCCTTTGGCCTCAGTTGAGTGTGAGGAACAAGAATTGTTGAAATATCGAGCAAGATCAATGAAGGAGCAGCATTCATCTAGTCCACAACCACAACCTTTACCTCTTCCATATCCTCAGGGTGGTGCTGCATTGAAGGTTTCTGGAAGCTTCAAGTCAGGGACAGGTAGTGGTCCTCTATATGCTTCTGGACCTTTGCCTGTTCCACCAACTGGATCGCTTCATAACTTTCTGTATGAGGAAATTGCTGCTGCTTGCCACAATTTCTCTCCAGATAGATGCATGTCAGAATGTCTTTCTTCTACCATTTATAAAGCTTCCTTTAAGGATGAGGCTTCAATCTCAAAGAAGTTGAAAGCCACTGTTACCCGCCTTCACTCATCAACTCAGGGCTTGAGGGAATTCATAAATGAGGTTAATACTCTTGCATCTTTGCAACATCCAAACCTCTGTAAATTGCTGGGATTTCATGCACGCGATGGCTCTGAGCCAAGGATGTTGGTTTATGAGAGGCTATGTCACGGGAGCTTGGACCGCCTTTTGTTTGGGGGATATGATGGCCCTTCAATCGATTGGAACAAAAGAATGAAAATCGCCTTATGTGCGGCACAAGGCCTTACTTTCTTGCATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAACAGCCAACATACAGATTGACATAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTTGGACATATTCCAGAGGAAGAGATTTCAAGCAACTCATCCGCTGTTGGAAACCTTTCAGTGGAGACACTGGAAAGAGGAATGCTTACTCCAAAGAGCAATGTATGGAGTTTTGGCGTTGTTCTTTTGGAGCTACTCACTGGCAGAAAGAATCATGACATTCATCACCCCAAGGAAGAGAGGGACTTAATCAAGTTGTGCAGGCCTTTCCTGGCTGATGATTTCAGACTATCATTGATCATGGATCCTCAACTTAAAGGCCGCTTTCCATCCATGGCAGCAAGAACAGTAGCTGATATTACTCAAAGATGCCTCCAAAAGGAGCCATCAGAAAGACCAACCATGAGAACCATTGTTGAGAAACTCCAAATGATACAGGATATGAAGTTCTCTTGTTTGTTCCCACTGCAAGAGTCATCAAGAATACAAATATCAAGATCACCAAGTCTTAATGGTATCCCATGTCATGCACCTAGAATTAGTTTCTCTCCATCACCATCATTAGCTAGACCATCTTTTTCACCTCCAAGACTGTTTGGTGTGCCCACCTTTCTTCCTCCTCCTCGGGTTGGTTCCTCCAATTTCTCTATTGAGGAACTTTATTATCAGGAAAGTAGGAAGTCATCACCCTCATCTAGGAGTTCTAGTTTTGAAGGATATTGA 1839 0.4383 MGCFTVLKCKKKKFDLIMCSKCASHNERVPTVLPEPQTHTPTLQSTIPSFVTRVEPIHPISRVTNDRTRALSAPLALDAAEQDALASIENQDQEVSKPRARSMKEQRSPSPQPLPLPSPPGGGVLKATLSLKMASGPLYAYGSALDAAEQDPLASVECEEQELLKYRARSMKEQHSSSPQPQPLPLPYPQGGAALKVSGSFKSGTGSGPLYASGPLPVPPTGSLHNFLYEEIAAACHNFSPDRCMSECLSSTIYKASFKDEASISKKLKATVTRLHSSTQGLREFINEVNTLASLQHPNLCKLLGFHARDGSEPRMLVYERLCHGSLDRLLFGGYDGPSIDWNKRMKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDIDFSAKLSGYGCVGHIPEEEISSNSSAVGNLSVETLERGMLTPKSNVWSFGVVLLELLTGRKNHDIHHPKEERDLIKLCRPFLADDFRLSLIMDPQLKGRFPSMAARTVADITQRCLQKEPSERPTMRTIVEKLQMIQDMKFSCLFPLQESSRIQISRSPSLNGIPCHAPRISFSPSPSLARPSFSPPRLFGVPTFLPPPRVGSSNFSIEELYYQESRKSSPSSRSSSFEGY* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01153 612 Gene3D Transferase(Phosphotransferase) domain 1 323 524 - -
Rops4g01153 612 SUPERFAMILY Protein kinase-like (PK-like) 217 517 IPR011009 -
Rops4g01153 612 PANTHER OS01G0588500 PROTEIN-RELATED 174 518 - -
Rops4g01153 612 Gene3D Phosphorylase Kinase; domain 1 220 320 - -
Rops4g01153 612 Pfam Protein tyrosine and serine/threonine kinase 251 514 IPR001245 GO:0004672|GO:0006468
Rops4g01153 612 ProSiteProfiles Protein kinase domain profile. 239 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01153 612 MobiDBLite consensus disorder prediction 88 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01153 Rops-Chr4 31207398 31211319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01153 214 518 Receptor kinase-like Gene Family AT4G02010 36.218 4.45e-51 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Rops4g01153 PK_Tyr_Ser-Thr 2.2e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01153 - - aprc:113849641 775.393