Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01149 ATGAGTAACAGAGATAGGAACAAAGAAGGGGGAGAAGAGAATGAATATGAGGAGAAAAGTTATGTGGGATTGGAATCAAAATCAGTGAGGCACAACAATGAGACAATAGAAGACCAGCTGCTAACAATTGATGAGAATCTTCTAGTTGACCCCAAACTATTGTTTATTGGGTCAAAAATTGGAGAAGGAGCTCATGGGAGAGTTTATGAAGGAAGGTATAGAGATCGAATTGTTGCAATTAAAGTTCTACATCGTGGGAACACTTCAGAAGAAAGAGCTGTCCTTGAAAATCGTTTTGCTCGGGAAGTTAACATGATGTCTCGTGTCCACCATGAGAATCTTGTTAAGTTCATTGGAGCTTGTAAGGATCCTCTGATGGTGATTGTCACAGAACTGTTACCAGGGATGTCACTGCGAAAATATTTGATCGCTCTACGCCCTAAACTATTAGACCTTTATGTGGCAATGAACTTTGCCCTTGATATTGCTCGAGCCATGGATTGGCTACATGCCAATGGGATCATACATAGAGATCTGAAACCTGACAATCTGCTGCTTACTGAAAATCATAAGTCAGTTAAACTTGCTGATTTTGGTCTGGCAAGAGAAGAAACTTTGACTGAAATGATGACAGCAGAAACTGGAACTTACCGTTGGATGGCACCAGAGTTGTACAGTACTGTAACATTGCGTCTAGGGGAGAAAAAGCATTACAACAACAAGGTTGATGTCTACAGCTTTGGAATTGTTTTGTGGGAGCTACTTACAAACCGCATGCCTTTTGAAGGAATGTCCAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCAAGAGAGGCCTAACCTTCCTTGTGATGTATCTCCTGATCTTGCCTACATCATACAATCATGCTGGGTTGAAGATCCTAACCTGAGACCAAGCTTTAGTCAGATTATCCGCATGCTCAATGCATTTCTCTTCACACTCCAACAACCATCCCCTTCTTTGCCAGAACCTGACAAGGAACCCGAGACTGCAACAAGTAACGGTACCATAACTGACTTTTCTACCCGGAGCAGCAGAGGGAAGTTTGCTTTTCTTCGCCATTTGTTTTCTTCAAAGAGGACCAAAAACTAA 1116 0.4185 MSNRDRNKEGGEENEYEEKSYVGLESKSVRHNNETIEDQLLTIDENLLVDPKLLFIGSKIGEGAHGRVYEGRYRDRIVAIKVLHRGNTSEERAVLENRFAREVNMMSRVHHENLVKFIGACKDPLMVIVTELLPGMSLRKYLIALRPKLLDLYVAMNFALDIARAMDWLHANGIIHRDLKPDNLLLTENHKSVKLADFGLAREETLTEMMTAETGTYRWMAPELYSTVTLRLGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKQERPNLPCDVSPDLAYIIQSCWVEDPNLRPSFSQIIRMLNAFLFTLQQPSPSLPEPDKEPETATSNGTITDFSTRSSRGKFAFLRHLFSSKRTKN* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01149 371 MobiDBLite consensus disorder prediction 326 349 - -
Rops4g01149 371 SMART serkin_6 54 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01149 371 MobiDBLite consensus disorder prediction 335 349 - -
Rops4g01149 371 SUPERFAMILY Protein kinase-like (PK-like) 54 341 IPR011009 -
Rops4g01149 371 Pfam Protein tyrosine and serine/threonine kinase 56 315 IPR001245 GO:0004672|GO:0006468
Rops4g01149 371 MobiDBLite consensus disorder prediction 1 21 - -
Rops4g01149 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Rops4g01149 371 ProSitePatterns Protein kinases ATP-binding region signature. 60 81 IPR017441 GO:0005524
Rops4g01149 371 PRINTS Tyrosine kinase catalytic domain signature 286 308 IPR001245 GO:0004672|GO:0006468
Rops4g01149 371 PRINTS Tyrosine kinase catalytic domain signature 130 143 IPR001245 GO:0004672|GO:0006468
Rops4g01149 371 PRINTS Tyrosine kinase catalytic domain signature 168 186 IPR001245 GO:0004672|GO:0006468
Rops4g01149 371 PRINTS Tyrosine kinase catalytic domain signature 242 264 IPR001245 GO:0004672|GO:0006468
Rops4g01149 371 CDD STKc_MAP3K-like 60 315 - -
Rops4g01149 371 Gene3D Transferase(Phosphotransferase) domain 1 138 345 - -
Rops4g01149 371 FunFam Kinase suppressor of Ras 1 43 133 - -
Rops4g01149 371 ProSiteProfiles Protein kinase domain profile. 54 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01149 371 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 54 317 - -
Rops4g01149 371 Gene3D Phosphorylase Kinase; domain 1 43 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01149 Rops-Chr4 30998728 31004437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01149 42 371 MAP Kinase Kinase Kinase AT5G01850 71.831 8.18e-179 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Rops4g01149 PK_Tyr_Ser-Thr 1.1e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01149 - - gmx:100816708 625.165