Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01146 ATGAGTGGAAGCCTCGGATTATCTAGCACAAACCTTCAGTTGAATCTAAAACTCAGTGAAAGAGCTACAGCTAGAACCATGTACAAGGGGAGATTAGGAGATAAAGCTCAGCTTGGATATGTTGAAACTGACCCTTCTGGTCGATATGGACGTTTCAGGGATATTCTAGGCAAAGGAGCTATGAAGATAGTGTATAGGGCATTTGATGAGGTCCTAGGAATAGAGGTGGCTTGGAACCAAGTCAAGCTCAGTGATGTCTTTCATTCACCAGATCAAATTCAGCGCCTATACTCAGAGGTTCATCTACTTAAGAACTTGGACCATGACTCTATCATTACCTTCCATAATTTTTGGATCGATGTCCATCTTGGAACCTTCAACTTCATCACTGAATTGTTCACCTCTGGCACCCTACGAGAGTATAAAAAGAAGTACCCTCGAGTAGATATCAGAGCAATAAAGAACTGGGCTCGCCAGATTCTAAATGGTTTGGAGTATTTGCACAGTCATGATCCTCCTGTGATCCATAGAGACCTCAAGTGTGATAATATCTTTGTAAATGGCCATCTGGGGCAGGTCAAGATTGGTGACTTAGGCCTTGCAGCCATTCTTCGTGGCTCTCAACATGCCCACAGTGTCATAGGTACACCAGAATTTATGGCACCAGAATTGTATGAAGAGGAATACAATGAGCTGGTAGACATATACTCCTTTGGGATGTGTATGATAGAGTTGTTTACTTCAGAGTTCCCATACAGCGAGTGCTCCAACCCTGCTCAAATATACAAGAAAGTTACTTCTGGGAAGCTACCAGATGCATTTTACAGAATCCATGATTTGGAAGCCCAGAGGTTTGTGGGAAAATGTTTGGCACATGTCTCTGAGAGGTTATCAGCAAAGGAGTTCTTGTTGGACCCATTTTTAGCCACGGACCAACTTGACTCACCATTGCCTAGCCTAACATCACCTAGAAAACATACTCAAACACTCAGTCTCACTGCTGCAGTTGCCAAAGAGCAACCCTCAATGAGTGACCAAACAAAGAGCACTCACATGACAATCACTGGATCAATGAATGAAGAGGATGACACAGTTTTCCTTAAAGTACAGATTTCTAACAAAACTGGGCTCACAAGAAATATATACTTTCCATTTGACACCATAAACGACACTGCCATTGAGGTGGCAATGGAGATGGTTAAAGAACTGGAAATTTGTGACTTGGAACCATTGGAGATTGCTGAAATGATAGAGGAGGAAATATCAGCTTTAGTTCCAACATGGAGGGATTATGGCACTTCTAAGTATCAAAGACAGCATAGTTTTAGCTATGAAGAAGAGGATGATATCAGTAACCACCACCCTTTATTCTCATCATCTTCTCGTTCTTCCTCTCATGGTTCTCTCCCAATGTATGGTTCTTCCTACAAAAGCAATATCCACCTTTGTCGGAACCATTACCCTTTTGCACAAGATTGGCCTCAAGATGATATATTTATGAATGATGATGCAAGCTCTCAAAGCTCAATGAACTCCTTCAAGTGTTTCAATTTCCATTGCCGCGACTCAGGCAATGAAGATGAGCATGGTACAAATCTAGTAGTAGGAGTAGAACCACTTTGCTGCACTCCAAAGGCTAACAACAAGTGCACAAGATTCTGTCCTAGAGAAGAGGTGGTGGAAGCAGATTTCAGTGAACAGTTTTGCAACATGAGAATTGATTCTCACTCTCATAGGTATCATAGGCCAGGCCATGGATTTCAGAGGCTGACAAGGATTCATTCTTTTGTGGATGTGAGAAGACAGCAACTACAACGATCTCTAATGGAGGAGATGCACAAGAGAAGGATGTTCAAGACAGTTGGTGCCATTGAGAATATTGGGTTTCAGAATCCAGAAGGAGGTGGATGTTTTTCCCGTTGA 1923 0.4228 MSGSLGLSSTNLQLNLKLSERATARTMYKGRLGDKAQLGYVETDPSGRYGRFRDILGKGAMKIVYRAFDEVLGIEVAWNQVKLSDVFHSPDQIQRLYSEVHLLKNLDHDSIITFHNFWIDVHLGTFNFITELFTSGTLREYKKKYPRVDIRAIKNWARQILNGLEYLHSHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQHAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCMIELFTSEFPYSECSNPAQIYKKVTSGKLPDAFYRIHDLEAQRFVGKCLAHVSERLSAKEFLLDPFLATDQLDSPLPSLTSPRKHTQTLSLTAAVAKEQPSMSDQTKSTHMTITGSMNEEDDTVFLKVQISNKTGLTRNIYFPFDTINDTAIEVAMEMVKELEICDLEPLEIAEMIEEEISALVPTWRDYGTSKYQRQHSFSYEEEDDISNHHPLFSSSSRSSSHGSLPMYGSSYKSNIHLCRNHYPFAQDWPQDDIFMNDDASSQSSMNSFKCFNFHCRDSGNEDEHGTNLVVGVEPLCCTPKANNKCTRFCPREEVVEADFSEQFCNMRIDSHSHRYHRPGHGFQRLTRIHSFVDVRRQQLQRSLMEEMHKRRMFKTVGAIENIGFQNPEGGGCFSR* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01146 640 CDD STKc_WNK 48 308 - -
Rops4g01146 640 FunFam Probable serine/threonine-protein kinase WNK1 34 131 - -
Rops4g01146 640 SUPERFAMILY Protein kinase-like (PK-like) 52 355 IPR011009 -
Rops4g01146 640 Gene3D Phosphorylase Kinase; domain 1 35 131 - -
Rops4g01146 640 ProSiteProfiles Protein kinase domain profile. 50 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01146 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Rops4g01146 640 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 36 479 - -
Rops4g01146 640 Pfam Protein kinase domain 54 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01146 640 SMART serkin_6 50 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01146 640 Gene3D Transferase(Phosphotransferase) domain 1 133 314 - -
Rops4g01146 640 FunFam probable serine/threonine-protein kinase WNK9 133 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01146 Rops-Chr4 30927592 30932959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01146 38 449 MAP Kinase Kinase Kinase AT3G51630 70.290 0.0 598
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Rops4g01146 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01146 K08867 - gmx:100816187 1026.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02085 8 48684159 48688823 Rops4g01146 4 30927592 30932959 PCT