Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01140 ATGCAGGGTGAACAAAACGGCGCCGTCGTAGACACGGGGAAAGAGAAACAGCAAGAGCCATGGACGACAAAGGAGGAGACACCAGCTGGTGTCGTTTTGTTCGGGAAATACGAGTTACTGAGTCTACTCGGCGTTGGCGCTTTCGCGAAGGTGTATCACGCGCGTGACGTGAACACGATGGAGAGCGTAGCGGTTAAGGCAGTTAGCAAACGCAAGGTCGAGAGAAACGGTTACACGGCGCACGTAGAACGCGAAGTCGCTATCATGCGCCGGTTGCGCCACCCGCACACTGTGAAACTCTTCGAGGTCCTCGCCACGAAAACCAAGATCTACTTTATCATGGAGTTCGCCGCCGGTGGAGAACTCTTCAGTTTAGTCGCCGCCGAGGGACGGTTAACAGAGGATCTCAGCCGTAGATACTTCCAGCAACTCATCTCCGCCGTGAAGTATTGCCACTCACGCGGCGTTTTCCACCGTGACCTCAAACTCGACAACCTCCTCCTCGACGAGAATAACAACCTCAAAGTCTCGGATTTCGGGTTAGGTTCAATTCATGACCCGACGCGACCCGAATTAATGCTCCACACCGTTTGCGGAACCCCTACTTACGTGGCACCAGAGATTCTCGCGAAGAAGGGATACGAAGGTGCAACGGTGGATATATGGTCATGCGGCGTCGTTTTGTTCGTTCTCACCGCTGGTTATTTACCCTTCAATGATTACAATATTACGGTTTTGTACAGGAAGATTTACCGTGGGTTATTCAGGTTCCCGAAATGGATGTCACGTGAACTCAAAAATCTCTTATCTCGTTTATTGGATACTAATCCCAATACGAGAATCACTTTAGATGAGATAATGAATGACCCGTGGTTCAATCGGGGTGGATACAAAGATACTTGGATCCGACCCGAATGGGAGGAGAATCGGATCATGACGAAGACGTTGAACGCGTTTGATTTGATATCATTCTCACCAGGGTTTGACATGTCGGGTTTGTTTTCCGACCCTGAATATTCGGATTCCGTGGAACGGTTTGTTACGGCGGAGAGACCGGAGAGTGTGGCTGAGAAGGTGGTGGAGGTGGCGGAAAGAAAAAGAGTGACGGTGAGGAAGGAGGTGAATGGTTGTGGAGTGAGGGTGGAGGGGTTGGATGGTAATTTTGAAATTCGGGTTGGGTTTTACCGGTTAACAGATGAGTTGGTTGTGGTTGAGGTAAAAAGAAGAGAGAGGAGAGTGGGAAGTGGTGCACTTTTTTGGAGAGATACATTGAGACCACAACTTCTTGCATTGGCTCATAAATGA 1305 0.4973 MQGEQNGAVVDTGKEKQQEPWTTKEETPAGVVLFGKYELLSLLGVGAFAKVYHARDVNTMESVAVKAVSKRKVERNGYTAHVEREVAIMRRLRHPHTVKLFEVLATKTKIYFIMEFAAGGELFSLVAAEGRLTEDLSRRYFQQLISAVKYCHSRGVFHRDLKLDNLLLDENNNLKVSDFGLGSIHDPTRPELMLHTVCGTPTYVAPEILAKKGYEGATVDIWSCGVVLFVLTAGYLPFNDYNITVLYRKIYRGLFRFPKWMSRELKNLLSRLLDTNPNTRITLDEIMNDPWFNRGGYKDTWIRPEWEENRIMTKTLNAFDLISFSPGFDMSGLFSDPEYSDSVERFVTAERPESVAEKVVEVAERKRVTVRKEVNGCGVRVEGLDGNFEIRVGFYRLTDELVVVEVKRRERRVGSGALFWRDTLRPQLLALAHK* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01140 434 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 31 409 - -
Rops4g01140 434 Gene3D Transferase(Phosphotransferase) domain 1 119 313 - -
Rops4g01140 434 ProSitePatterns Protein kinases ATP-binding region signature. 43 66 IPR017441 GO:0005524
Rops4g01140 434 SUPERFAMILY Protein kinase-like (PK-like) 33 316 IPR011009 -
Rops4g01140 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 156 168 IPR008271 GO:0004672|GO:0006468
Rops4g01140 434 Gene3D Phosphorylase Kinase; domain 1 34 118 - -
Rops4g01140 434 Pfam NAF domain 314 372 IPR004041 GO:0007165
Rops4g01140 434 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Rops4g01140 434 SMART serkin_6 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01140 434 Gene3D Kinase associated domain 1, KA1 314 433 - -
Rops4g01140 434 MobiDBLite consensus disorder prediction 1 24 - -
Rops4g01140 434 FunFam Aurora kinase A 31 120 - -
Rops4g01140 434 ProSiteProfiles Protein kinase domain profile. 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01140 434 Pfam Protein kinase domain 37 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01140 434 FunFam CAMK family protein kinase 32 319 - -
Rops4g01140 434 CDD CIPK_C 317 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01140 Rops-Chr4 30813099 30814403 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01140 32 434 CBL-interacting serine-threonine protein kinases AT2G30360 56.145 2.97e-160 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops4g01140 Pkinase 6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01140 - K12761 gmx:100810319 497.278