Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01137 ATGGAACAGAAAGGAAGTGTGCTTATGCAACGATATGAACTAGGGAAATTATTAGGCCAAGGAACTTTTGCAAAGGTCTACCATGCAAGGAACCTCAAAACTGGCATGAGTGTGGCCATTAAAATTATTGATAAGGAGAAGGTTTTGAAGGTTGGGATGATTGATCAAATTAAGCGCGAAATTTCAGTGATGAGAATAATCAGGCATCCACATGTGGTTGAGCTTTATGAGGTGATGGCAAGCAAAACCAAAATTTACTTTGTCATGGAGTATGTGAAAGGTGGTGAGTTGTTCAACAAGGTAGCCAAAGGAAGGCTCAAGCAAGATGATGCTAGGAGATATTTTCAGCAATTGATCAGTGCTGTTTCCTATTGCCATAGCAGAGGTGTTTGTCATCGTGATCTAAAACCAGAAAATCTTCTATTGGATGAAAATGGAAATTTGAAGGTCTCAGATTTTGGATTAAGTGCTCTTGCTGAGTCTAAGCACCAAGATGGATTACTCCATACTATATGTGGTACACCTGCCTATGTTGCTCCAGAAGTGATAAACAGAAAGGGATATGATGGGGCCAAAGCTGATATATGGTCATGTGGGGTGATCTTGTATGTTCTATTGGCTGGTTATCTTCCATTTAGAGATTCAAATTTGTTGGAGATGTACAGGAAGATTGGTAAGGCAGAATTCAAATTTCCTAACTGGTTTGCACCAGATGTTCGCAGATTGTTGTCCAAAATCTTGGATCCAAACCCAAAGACCAGGATATCATTGACCAAAATCATGGAAAGTTCTTGGTTCAGAAAGGGGTTAGAGAAGCAAACTGTTTCTGACAGTGAATTCAAAGAACTAGCTCCTCTAGATGCTGATGGAGTATTTGGAGATTGTGAGAATGGAGGTTCCACTGAACTATCAAAACCTTGTAATTTAAATGCTTTTGATATCATCTCCCTTTCATCAGGTTTTGATTTGTCTGGTTTGTTTGAGGAGACTGATCAAAAGAAAGAAGTGATGTTTACTTCTAACAAGCCTGCCGCAATTATCATCTCCAAGTTAGGAGAAATTTGTAAGCGTTTTGGGCTGAAAGTGAAGAAGAAAGATGGAGGTTTGTTCAAGTTGGAAGGTTCCAAGGAAGGTAGGAAAGGGCCTTTGGGCATTGATGCAGAGATTTTTGAGATCACCCCAGTTTTCCATCTAGTGGAATTCAAAAAGACCAATGGAGATACCTTGGAGTACCAAAAGCTTTTGAAACAAGATGTTAGGCCTGCACTTAAGGATATAATTTGGAACTGGCAAGGAGAACAACCACAGCAATTGCAACATGGAGTAGAGCAGAAAGAGGAACAGCCTTCTCATCCTGGCATATCAGAGGTTGTACCACACCCAACTTCATAA 1392 0.4009 MEQKGSVLMQRYELGKLLGQGTFAKVYHARNLKTGMSVAIKIIDKEKVLKVGMIDQIKREISVMRIIRHPHVVELYEVMASKTKIYFVMEYVKGGELFNKVAKGRLKQDDARRYFQQLISAVSYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSALAESKHQDGLLHTICGTPAYVAPEVINRKGYDGAKADIWSCGVILYVLLAGYLPFRDSNLLEMYRKIGKAEFKFPNWFAPDVRRLLSKILDPNPKTRISLTKIMESSWFRKGLEKQTVSDSEFKELAPLDADGVFGDCENGGSTELSKPCNLNAFDIISLSSGFDLSGLFEETDQKKEVMFTSNKPAAIIISKLGEICKRFGLKVKKKDGGLFKLEGSKEGRKGPLGIDAEIFEITPVFHLVEFKKTNGDTLEYQKLLKQDVRPALKDIIWNWQGEQPQQLQHGVEQKEEQPSHPGISEVVPHPTS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01137 463 Gene3D Transferase(Phosphotransferase) domain 1 3 292 - -
Rops4g01137 463 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01137 463 MobiDBLite consensus disorder prediction 437 463 - -
Rops4g01137 463 CDD STKc_SnRK3 11 265 - -
Rops4g01137 463 Pfam NAF domain 306 364 IPR004041 GO:0007165
Rops4g01137 463 Gene3D Kinase associated domain 1, KA1 304 429 - -
Rops4g01137 463 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 424 - -
Rops4g01137 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Rops4g01137 463 FunFam Non-specific serine/threonine protein kinase 2 286 - -
Rops4g01137 463 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops4g01137 463 SUPERFAMILY Protein kinase-like (PK-like) 8 276 IPR011009 -
Rops4g01137 463 ProSiteProfiles NAF domain profile. 304 328 IPR018451 GO:0007165
Rops4g01137 463 FunFam Non-specific serine/threonine protein kinase 304 428 - -
Rops4g01137 463 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Rops4g01137 463 CDD CIPK_C 310 424 - -
Rops4g01137 463 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Rops4g01137 463 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01137 Rops-Chr4 30781657 30785408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01137 1 436 CBL-interacting serine-threonine protein kinases AT5G58380 67.253 0.0 622
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops4g01137 Pkinase 9.6e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01137 K07198 - gmx:100815651 823.542