Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01127 ATGGCCTCACATGGGTATTTCTATGTTGTCCTTCATGCCCTTGTGTTTGCAGCAGTTGTAACCACAGCTTTCTCACAACTGACACCTAATTACTATGACTACACTTGCCCTAATGCTTTGAGCACCATCAAAAGTGCTGTGGAGGCTGCTGTGCAGAAAGAGCGACGTATGGGTGCTTTTTTGCTACGCTTGCACTTCCGTGATTGCTTTGTTAACGGCTGTGATGGTTCAGTTCTTCTAGACTCCACATCCTCCATTGATAGCGAAAAGAATGCAAATGCTAATTTCCAATCGGCTCGAGGATTTGAAGTGGTGGATGAGATCAAGCAGGCAGTGGACGAAGCATGTGGAAAACCTGTTGTTTCTTGCGCAGACATATTAGCAGTTGCCGCTAGAGACTCCGTCGTTGCGCATTATTTTACTGGCTTCACAGCATAG 438 0.4612 MASHGYFYVVLHALVFAAVVTTAFSQLTPNYYDYTCPNALSTIKSAVEAAVQKERRMGAFLLRLHFRDCFVNGCDGSVLLDSTSSIDSEKNANANFQSARGFEVVDEIKQAVDEACGKPVVSCADILAVAARDSVVAHYFTGFTA* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01127 145 SUPERFAMILY Heme-dependent peroxidases 26 138 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops4g01127 145 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01127 145 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01127 145 PANTHER PEROXIDASE 72-RELATED 23 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01127 145 ProSiteProfiles Plant heme peroxidase family profile. 26 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01127 145 Pfam Peroxidase 44 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01127 145 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01127 145 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01127 145 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01127 145 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01127 145 Gene3D - 27 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01127 Rops-Chr4 30618590 30628468 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01127 26 137 Peroxidase AT5G05340 66.071 2.55e-46 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01127 K00430 - gmx:121174583 227.254