Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01126 ATGGCCTCACATGGGTGTTTCTATGTTGTGCTTCATGCCCTTGTGTTTGCAGCAGTTGTAACCACAGCTTTCTCGCAACTGTTACCTAATTACTATGACTACACTTGCCCTAATGCTTTGAGCACCATCAAAAGTGTTGTGGAGGTTGCTGTACAGAAAGAGCGACGTATGGGTGCTTCTTTGCTACGCTTGCATTTCCATGATTGCTTTGTTAACGGCTGTGATGGTTCAGTTCTTCTAGACTCCACATCCTCCATTGATAGCGAAAAGAATGCAAATGCTAATTTCCAATCGGCTCGAGGATTTGAAGTGGTGGATGAGATCAAGCAAGCAGTGGACGAAGCATGTGGAAAACCTGTTGTTTCTTGCGCAGACATATTAGCTGTTGCCGCTAGAGACTCTGTCGTTGCGTTAGGAGGACCAGCATGGGAAGTGAAACTAGGAACCAAGGAGATTAATGATGATACCAGTGAGAAGTCACATACCTCTGAAGTAGAAGCAACACCTTCTCCTCACCCCACAATATCCACAATATCCACAAATCCATCTCTTGAGAATACTCTTGAGGTAAGCTCTCTAAACTCTACAAGTATACCTTTATTAGCCAACAATACTCTTGAAGGCTATAAGTTACCATACAAGCATAATCGAGATAAGCCTCCAGATAGATATTCTTCTTACATTGAAGGTCGACGATCGAAATACCCAATTTCCAATTATGAATCTAAAAAGAAGCTTCCTAAACCTCTCAAAGCTTTTGCAAATGAACTCTCCTCATGTCAAATTCCTACATGTGTTGAAGAAGCGATTAAAGATCCTAAATTGATCCAAGCTACGAAGGAGGATATATAG 852 0.4178 MASHGCFYVVLHALVFAAVVTTAFSQLLPNYYDYTCPNALSTIKSVVEVAVQKERRMGASLLRLHFHDCFVNGCDGSVLLDSTSSIDSEKNANANFQSARGFEVVDEIKQAVDEACGKPVVSCADILAVAARDSVVALGGPAWEVKLGTKEINDDTSEKSHTSEVEATPSPHPTISTISTNPSLENTLEVSSLNSTSIPLLANNTLEGYKLPYKHNRDKPPDRYSSYIEGRRSKYPISNYESKKKLPKPLKAFANELSSCQIPTCVEEAIKDPKLIQATKEDI* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01126 283 PANTHER PEROXIDASE 72-RELATED 24 181 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01126 283 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01126 283 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01126 283 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01126 283 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01126 283 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01126 283 ProSiteProfiles Plant heme peroxidase family profile. 26 178 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01126 283 Pfam Peroxidase 44 175 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01126 283 FunFam Peroxidase 30 179 - -
Rops4g01126 283 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01126 283 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01126 283 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01126 283 MobiDBLite consensus disorder prediction 163 177 - -
Rops4g01126 283 MobiDBLite consensus disorder prediction 151 177 - -
Rops4g01126 283 SUPERFAMILY Heme-dependent peroxidases 26 177 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops4g01126 283 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Rops4g01126 283 Gene3D - 27 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01126 Rops-Chr4 30576781 30581709 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01126 25 178 Peroxidase AT5G05340 56.494 1.21e-54 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01126 K00430 - gmx:121174583 254.988