Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01124 ATGGGAAAAGGGATTCTCATGGTGCAGTCTGCATGTAATAATGGCCCTATTCCAGGTACAGTCGCAAGTGTAGCACCATGGATGCTATCTGTTGCAGCAAGTACCATAGATCGTCAATTCATTACCAAACTAGTTCTTGGGAATGGAAAAACACTAATTGGGAAATCGATAAACTCTTTCACATCAAATGGAACAAAATTTCCCCTTGCTAAGCTGTATGGTGATTATGATGATAATCTTGAGTCTGTGAAAGGAAAGATAGCTTTATGTGGTTATGATGATGAAGATGCAGCTCAATCTGAAGGGGCAATTGGTGCAATCAGAGGGAAACCCACTGAGGGTTTTACACCCGAAGTTGCTATAATACCTTATGTGGAGTTGGATTCCTATGACTATGATCTTGTGGAATCCTACAAAAATTCAACTAAAGATCCAAAAGGTGAAATATTCAAGAGTGAGATAATTGAAGATCATATAGCCCCTACTGTTGCTGAGTTTTCTTCACGTGGACCAAATGTCAAAGTTCCAGAAATTTTGAAACCAGACATCAGTGCCCCTGGAGTACAAATATTGGCTGCATATTCACCTATGGCTTCACCGTCACAAAATCCTAATGATGAAAGATCTGTCAAATACAATATAATATCTGGAACATCTATGTCATGTCCCCATGTTGCTGGAATAGCTGCATATGTGAAATATTTTCATTTGGATTGGTCACCAACAGCCATTAAATCTGCGATTATGACTTCAGCACAACGCATGAATGGTTCGAAGGATCAAATCGGTGAATATGCTTATGGATCAGGGCATGTCAATCCTGTGCAAGCCATTAATCCTGGCCTTATTTATGACATTGGTAAGGAGGATTATATACAAATGCTTTGCAATTTGGGATCCAGTAATGAAAAGATAAAAAAAATAATTGGTGAAAGTATCCATTACTTTGGAGAACCTGATAGATCCTTAGTAAGAAATCTTAATTATCCTGCATTTGCAATTCAAGTTCAGCCTGAGGCATCTTTCAATGTAAGGTTTAATAGAACAGTCACAAACGTTGGGTTAGCAAACTCAAATTACAAGGCAACTATCTTCCCCAATCCACAAATCAGCATTACAGTGGCACCTGAGATTTTGTCCTTCAAATCATTGAACGAGAAGCAGTCTTTTGTTGTCAGTATCATTGGTGGTCATATTCCAAATAAAACCGTGTTGAGCTCACAACTAATATGGTCATATGGTAGCCACATTGTGCGAAGTCCAATTGTTGTGGATGTTTCTAGTTAA 1287 0.3846 MGKGILMVQSACNNGPIPGTVASVAPWMLSVAASTIDRQFITKLVLGNGKTLIGKSINSFTSNGTKFPLAKLYGDYDDNLESVKGKIALCGYDDEDAAQSEGAIGAIRGKPTEGFTPEVAIIPYVELDSYDYDLVESYKNSTKDPKGEIFKSEIIEDHIAPTVAEFSSRGPNVKVPEILKPDISAPGVQILAAYSPMASPSQNPNDERSVKYNIISGTSMSCPHVAGIAAYVKYFHLDWSPTAIKSAIMTSAQRMNGSKDQIGEYAYGSGHVNPVQAINPGLIYDIGKEDYIQMLCNLGSSNEKIKKIIGESIHYFGEPDRSLVRNLNYPAFAIQVQPEASFNVRFNRTVTNVGLANSNYKATIFPNPQISITVAPEILSFKSLNEKQSFVVSIIGGHIPNKTVLSSQLIWSYGSHIVRSPIVVDVSS* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01124 428 CDD PA_subtilisin_like 44 149 - -
Rops4g01124 428 Pfam Subtilase family 2 270 IPR000209 GO:0006508|GO:0008236
Rops4g01124 428 ProSitePatterns Serine proteases, subtilase family, serine active site. 217 227 IPR023828 -
Rops4g01124 428 ProSiteProfiles Serine proteases, subtilase domain profile. 1 278 - -
Rops4g01124 428 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 424 IPR045051 -
Rops4g01124 428 SUPERFAMILY Subtilisin-like 3 279 IPR036852 GO:0004252|GO:0006508
Rops4g01124 428 Gene3D - 295 427 - -
Rops4g01124 428 Gene3D Peptidase S8/S53 domain 2 291 IPR036852 GO:0004252|GO:0006508
Rops4g01124 428 Gene3D - 37 156 - -
Rops4g01124 428 Pfam Fibronectin type-III domain 326 424 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01124 Rops-Chr4 30509311 30510597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01124 1 424 Subtilisin-like Serine Gene Family AT5G58830 50.816 3.33e-138 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01124 - - lang:109338864 481.1