Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01123 ATGGCCAAGCATAGTTTTACGGTCACTTATGTTTCTTTCATTCTTGCATGCATATTTTCCCAGTCCTATGAAGCTCTTGCTGAAAAACCAAAGCTTCATATTGTGTATATGGGTTCCCTTCCAAAGAGACCTTATTCACCAACCTCTCACCATCTTAGCATGCTGCAGCAAGTCTTTGATGGCAACAATTCAGTAAGTTCCCTCATTCATAGTTATAAGAGAAGCTTTAATGGGTTTGCTGCCATGCTAAGCGATCAACAAAGGGACAAGCTAACTCAGATGGAAGGTGTTATATCAGTTTTCCCAAGCAAAACTCTTCAAACACAAACGACAAAATCTTGGGACTTTATGGGGTTTCCTCAATCAGTCAAACGTAGCCATACTACTGAGAGTGATATGGTGATTGGAGTTTTTGACTCTGGAATTTGGCCAGAATCAGAGAGTTTCAGTGATCAAGGTTTTGGCCCCATTCCCAAAAAGTGGAAGGGTACTTGTGCAGGTGGAAAGTACTTCACTTGCAACAAGAAGATTATTGGAGCAAGGTTTTATGGTGATGGTTCTGCCAGAGACTTTGTTGGCCATGGAACCCATACTGCATCAACAGCAGCAGGAAACCAAGTTAACAAGGTGAGCTTTTATGGATTTGCACAGGGCACTGCAAGAGGAGGGGTTCCATCAGCAAGAGTTGCCATGTATAAAGTATGTGCTGAAAAATGCACGGAAGCTAATATATTGGCTGCTTATGATGATGCCATAGCAGATGGAGTTGACATCATTTCCATTTCATTGGGGACGACTATTGCAATCGACTTTGAGAATGATGCTATTGCAATTGGTTCATTCTATGCTATGGGAAAAGGGATTCTCACAGTGCATTCAGCAGGTAACAGTGGCCCTAATCCAGGCACAGTCGCAAGTGTAGCACCATGGATGCTATCTGTTGCAGCCAGTACCATAGATCGTCAATTCATTACCAAGCTAGTTCTTGGGAATGGAAAAACACTAGTTGGGAAATCAATAAACTCTTTCACATCAAATGGAACAAAATTTCCCCTGGCTAAGTTGTTTGGTGATTATGATGATGAGTCCGTGAAAGGAAAGATAGCTTTATGTGGTTATGCTGATGAAGAGGCAGCTCATACTGAAGGGGCAATTGGTGCAATCAAAGGGAAACTCACTAAGGGTTTTATACCTGAAGTTGCTATAATACCTTCTGTGGCTTTGGATTCCTATGACTATGCTCTCGTGGAATCCTACAAGAATTCAACAAAAGATCCAAAAGGTGAAATACTCAAGAGTGAGATAACTAGAGATCATACAGCCCCTGCTGTTGCTGAGTTTTCTTCACGTGGACCAAATGTCAAAGTTCCAGAAATTCTGAAACCAGATATCAGTGCCCCTGGAGTAGAAATATTGGCTGCATATTCACCCATGGCTTCAGTCTCACAGAATCCTGAAGATGAAAGATCTGTCAAATACAACATAATATCAGGAACATCTATGTCATGTCCCCATGTTGCTGGAATAGCTGCATATGTGAAATCTTTTCACTTGGATTGGTCGCCAGCAGCCATCAAATCTGCAATTATGACTTCAGCACAACGCATGAATGGTTCTAAGGATCTCAGTGAATATGCTTATGGATCAGGGCATGTCAATCCTGTGCAAGCCATTAATCCTGGCCTTATTTATGACATTGGTAAAGAGGCTTATATACAAATGCTCTGCAATTTGGGATACAGTAATGAAAAGATAAAAAAAATATCTGGTGAAAATATCCATTGCTTTGGAGCACCTGATAGATCCTTAGTAAGAAATCTTAATTATCCTGCACTTGCAATTCAAGTTCAGCCTGAGGCATCTTTCAATGTATGGTTTAGTAGAACAGTCACAAACGTTGGGTTACCAAACTCAAATTACAAGGCAACTATCTTGCCCAATCCACAAATCAACATTACAGTGGCACCTGAGATTTTGTCCTTCAAATCATTCAACGACAAGCAGTCCTTTGTTGTCAGCATCACTGGTGGTCATATTCCAAATAAAACTGTGCTGAGCTCACAACTAATATGGTCAGATGGCAGCCACATTGTGCGGAGTCCAATTGTTGTTGATGTTTCTAGTTAG 2127 0.4109 MAKHSFTVTYVSFILACIFSQSYEALAEKPKLHIVYMGSLPKRPYSPTSHHLSMLQQVFDGNNSVSSLIHSYKRSFNGFAAMLSDQQRDKLTQMEGVISVFPSKTLQTQTTKSWDFMGFPQSVKRSHTTESDMVIGVFDSGIWPESESFSDQGFGPIPKKWKGTCAGGKYFTCNKKIIGARFYGDGSARDFVGHGTHTASTAAGNQVNKVSFYGFAQGTARGGVPSARVAMYKVCAEKCTEANILAAYDDAIADGVDIISISLGTTIAIDFENDAIAIGSFYAMGKGILTVHSAGNSGPNPGTVASVAPWMLSVAASTIDRQFITKLVLGNGKTLVGKSINSFTSNGTKFPLAKLFGDYDDESVKGKIALCGYADEEAAHTEGAIGAIKGKLTKGFIPEVAIIPSVALDSYDYALVESYKNSTKDPKGEILKSEITRDHTAPAVAEFSSRGPNVKVPEILKPDISAPGVEILAAYSPMASVSQNPEDERSVKYNIISGTSMSCPHVAGIAAYVKSFHLDWSPAAIKSAIMTSAQRMNGSKDLSEYAYGSGHVNPVQAINPGLIYDIGKEAYIQMLCNLGYSNEKIKKISGENIHCFGAPDRSLVRNLNYPALAIQVQPEASFNVWFSRTVTNVGLPNSNYKATILPNPQINITVAPEILSFKSFNDKQSFVVSITGGHIPNKTVLSSQLIWSDGSHIVRSPIVVDVSS* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01123 708 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 108 IPR037045 -
Rops4g01123 708 SUPERFAMILY Subtilisin-like 113 562 IPR036852 GO:0004252|GO:0006508
Rops4g01123 708 Gene3D - 320 437 - -
Rops4g01123 708 ProSitePatterns Serine proteases, subtilase family, serine active site. 498 508 IPR023828 -
Rops4g01123 708 Gene3D Peptidase S8/S53 domain 132 571 IPR036852 GO:0004252|GO:0006508
Rops4g01123 708 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Rops4g01123 708 PRINTS Subtilisin serine protease family (S8) signature 190 203 IPR015500 -
Rops4g01123 708 PRINTS Subtilisin serine protease family (S8) signature 497 513 IPR015500 -
Rops4g01123 708 Gene3D - 575 707 - -
Rops4g01123 708 Pfam Peptidase inhibitor I9 33 108 IPR010259 -
Rops4g01123 708 CDD PA_subtilisin_like 327 430 - -
Rops4g01123 708 CDD Peptidases_S8_3 106 533 IPR034197 -
Rops4g01123 708 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Rops4g01123 708 Pfam Subtilase family 131 548 IPR000209 GO:0006508|GO:0008236
Rops4g01123 708 ProSiteProfiles Serine proteases, subtilase domain profile. 113 558 - -
Rops4g01123 708 Pfam Fibronectin type-III domain 606 704 IPR041469 -
Rops4g01123 708 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 704 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01123 Rops-Chr4 30484228 30486354 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01123 14 704 Subtilisin-like Serine Gene Family AT5G58830 53.107 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01123 - - psat:127076787 828.165