Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops4g01122 ATGGCCTTGCAAAGGTATCTCTCTGTTGTCCTCCATGCCTTTGTGTTTGCAGCTGTTGCAAACACAGCTTTTTCACAATTGTCACCAAATTACTATGAATACACTTGCCCTAACGCTTTGAGCACCATCAGAAGTGTCGTGTTTGCTTCCCTGCAGAAAGAAGCCCGTATGGGTGCTGCATTGCTACGCTTGCACTTCCATGATTGTTTCGTTAACGGTTGTGATGGTTCAATTCTTCTAGACTCCACACCCTATATTGATAGCGAAAAGAATGCATTACCTAATGCCAACTCTGTTCGAGGATTTGAAGTGATCGATGCGATCAAGCAGGCAGTGGACGAAGCATGTGGAAAACCTGTTGTTTCTTGTGCAGACATATTGGCTGTTGCAGCTCGAGACTCTGTCGTTGCGGGTCTTCCTCTTATCTCTCAACTCCAAATTGCTTCAGTTCCTACTTTGAAGAATTTGCTCTCTCAAGATGAAACTCCCACAACCGATGCAACACCTCAAAAGTCTTCTCGATCTTTCTCCTTGTTATCACCATTTCGAAGTAACAGCAGAGAGAAAAAGATAATGATGGCTTGA 585 0.4393 MALQRYLSVVLHAFVFAAVANTAFSQLSPNYYEYTCPNALSTIRSVVFASLQKEARMGAALLRLHFHDCFVNGCDGSILLDSTPYIDSEKNALPNANSVRGFEVIDAIKQAVDEACGKPVVSCADILAVAARDSVVAGLPLISQLQIASVPTLKNLLSQDETPTTDATPQKSSRSFSLLSPFRSNSREKKIMMA* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops4g01122 194 ProSiteProfiles Plant heme peroxidase family profile. 26 194 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01122 194 Gene3D - 27 186 - -
Rops4g01122 194 MobiDBLite consensus disorder prediction 159 179 - -
Rops4g01122 194 SUPERFAMILY Heme-dependent peroxidases 26 137 IPR010255 GO:0004601|GO:0006979|GO:0020037
Rops4g01122 194 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01122 194 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01122 194 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01122 194 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01122 194 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01122 194 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Rops4g01122 194 Pfam Peroxidase 44 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Rops4g01122 194 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Rops4g01122 194 PANTHER PEROXIDASE 72-RELATED 22 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops4g01122 Rops-Chr4 30463568 30469487 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops4g01122 25 137 Peroxidase AT5G05340 64.602 8.72e-47 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops4g01122 K00430 - gmx:100812820 211.075