LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Rops4g01121	ATGGGAGGTGTTATCTCAGTGTTCCCGAGTAAAACTCTTCAAACACAAACTACAAAATCTTGGGACTTTATGGGGTTTCATCAGTTAGTCAAACGCAGCCACACTACTGAGAGTGATATGGTGATTGGAGTTTTTGACACTGGGATTTGGCCAGAATCAGAAAGTTTCACTGATCAAGGTTTCGGTCCCATTCCCAAAAAGTGGAAGGGTACTTGTGTAGGTGGCAAGTACTTCACATGCAACAAGAAGATTATTGGAGCAAGGTTTTATGGTGATGGTTCTGCCAGAGACTTTGATGGCCATGGAACCCATACTACATCAACAGCAGCAGGAAACCAAGTTAAAAATGTGAGCTTTTATGGACTTGCACAAGGCACTGCAAGAGGAGGAGTTCCATCAGCAAGAGTTGCCATATACAAAGTATGTACTAAAAAATGTACAGAAGCTAATATATTGGCTGCTTTTGATGATGCCATAGCAGATGGTGTTGACATCATTTCAATTTCATTGGGGACCAATATTGCATTAGACTTTGAGAATGATGTTATTGCAATTGGTTCATTTCATGCTATGGGAAAAGGGATTCTCACGGTGCAGTCTGCAGGTAATAATGACCCTATTCCAGGCACAGTCGCAAGTGTAGCACCATGGATGCTATCTGTTGCAGCAAGTACCATAGATCATCAATTCATTACCAAACTAGTTCTTGGGAATGGAAAAACACTAATTGGGAAATCGATAAACTCTTTCACATCAAATGGAACAAAATTTCCCCTTGCTAAGCTGTATGGTGATTATGATGATAATCTCGAGTCTGTGAAAGGAAAGATAGCTTTATGTGGTTATGATGATGAAGATGAAGCTCAATCTCAAGGGGCAATTGGTGCAATCAGAGGGAAACCCACTGAGGATCCAAAAGGTGAAATATTCAAGAGTGAGATAATTGAAGATCATATAGCCCCTACTGTTGCTGAGTTTTCTTCACGTGGACCAAATGTCAAAGTTCCAGAAATCTTGAAACCAGACATCAGTGCCCCTGGAGTACAAATATTGGCTGCATATTCACCTATGGCTTCACCGTCACAAAATCCTAATGATGAAAGATCTGTCAAATACAATATAATATCTGGAACATCTATGTCATGTCCCCATGTTGCTGGAATAGCTGCATATGTGAAATCTTTTCATTTGGATTGGTCACCAACAGCCATTAAATCTGCGATTATGACTTCAGCACAACGCATGAATGGTTCGAAGGATCAAATCGGTGAATATGCTTATGGATCAGGGCATGTCAATCCTGTGCAAGCCATTAATCCTGGCCTTATTTATGACATTGGTAAGGAGGATTATATACAAATGCTTTGCAATTTGGGATACAGTAATGAAAAGATAAAAAAAATAATTGGTGAAAATATCCATTGCTTTGGAGAACCTGATAGATCCTTAGTAAGAAATCTTAATTATCCTGCACTTGCAATTCAAGTTCAGCCTGAGGCGTCTTTCAATGTAAGGTTTAATAGAACAGTCACAAACATTGGGTTAGCAAACTCAAATTACAAGGCAACTATCTTCCCCAATCCACAAATCAACATTACAGTGGCACCTGAGATTTTGTCCTTCAAATCATTGAACGAGAAGCAGTCTTTTGTTGTCAGTATCATTGGTGGTCATATTCCAAATAAAACTGTGTTGAGCTCACAACTAATATGGTCAGATGGCAGCCACATTGTGCGAAGTCCAATTGTTGTGGATGTTTCTAGTTAG	1767	0.3956	MGGVISVFPSKTLQTQTTKSWDFMGFHQLVKRSHTTESDMVIGVFDTGIWPESESFTDQGFGPIPKKWKGTCVGGKYFTCNKKIIGARFYGDGSARDFDGHGTHTTSTAAGNQVKNVSFYGLAQGTARGGVPSARVAIYKVCTKKCTEANILAAFDDAIADGVDIISISLGTNIALDFENDVIAIGSFHAMGKGILTVQSAGNNDPIPGTVASVAPWMLSVAASTIDHQFITKLVLGNGKTLIGKSINSFTSNGTKFPLAKLYGDYDDNLESVKGKIALCGYDDEDEAQSQGAIGAIRGKPTEDPKGEIFKSEIIEDHIAPTVAEFSSRGPNVKVPEILKPDISAPGVQILAAYSPMASPSQNPNDERSVKYNIISGTSMSCPHVAGIAAYVKSFHLDWSPTAIKSAIMTSAQRMNGSKDQIGEYAYGSGHVNPVQAINPGLIYDIGKEDYIQMLCNLGYSNEKIKKIIGENIHCFGEPDRSLVRNLNYPALAIQVQPEASFNVRFNRTVTNIGLANSNYKATIFPNPQINITVAPEILSFKSLNEKQSFVVSIIGGHIPNKTVLSSQLIWSDGSHIVRSPIVVDVSS*	589

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Rops4g01121	588	ProSitePatterns	Serine proteases, subtilase family, serine active site.	377	387	IPR023828	-
	Rops4g01121	588	Pfam	Fibronectin type-III domain	486	584	IPR041469	-
	Rops4g01121	588	PRINTS	Subtilisin serine protease family (S8) signature	37	56	IPR015500	-
	Rops4g01121	588	PRINTS	Subtilisin serine protease family (S8) signature	97	110	IPR015500	-
	Rops4g01121	588	PRINTS	Subtilisin serine protease family (S8) signature	376	392	IPR015500	-
	Rops4g01121	588	SUPERFAMILY	Subtilisin-like	19	439	IPR036852	GO:0004252\|GO:0006508
	Rops4g01121	588	Gene3D	-	302	316	-	-
	Rops4g01121	588	Gene3D	-	227	294	-	-
	Rops4g01121	588	Pfam	Subtilase family	38	430	IPR000209	GO:0006508\|GO:0008236
	Rops4g01121	588	CDD	Peptidases_S8_3	13	412	IPR034197	-
	Rops4g01121	588	Gene3D	Peptidase S8/S53 domain	317	451	IPR036852	GO:0004252\|GO:0006508
	Rops4g01121	588	Gene3D	Peptidase S8/S53 domain	39	226	IPR036852	GO:0004252\|GO:0006508
	Rops4g01121	588	Gene3D	-	455	587	-	-
	Rops4g01121	588	ProSiteProfiles	Serine proteases, subtilase domain profile.	20	438	-	-
	Rops4g01121	588	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	3	584	IPR045051	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Rops4g01121	Rops-Chr4	30444063	30445918	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Rops4g01121	1	584	Subtilisin-like Serine Gene Family	AT5G58830	54.545	0.0	658

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Rops4g01121	-		-	lang:109341651	707.597